Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13976g00002 ATGGGAATGGTTTTTCATATAAGGATGTCTTGCAGCGGGTATATGGCACCAGAATATGCTGTTGATGGACAATTTTCAGTGAAATCTGATGTCTTTAGCTTTGGCATTTTAGTGTTGGAGGTTATATGTGGAAGGAGAAATAAAGGACTTTATCATGCGGATGACAGTCATAACCTCGTTGGTTATGCATGGACAATATGGAAAGAAGGCAGGGCATTAGAGTTGATTGACTTAAAGATAAATGAGTCATGCATTGAATCAGAAGTACTTCGTTGCCTCCATATTAGTCTTTTATGTGTGCAGCAGTACCCAGAAGACAGGCCTACAATGGCTTCAGTGATTTTAATGTTGGGGAGTGAGATAGAATTGGTTGAACCTAAAGAACCTGGTTTTGTTTGCAGGAAAGTTTCTGTTGATGCAGATTCACACTCAAATCAGAAGGATACAATTTCAACTAACGAAGTGACCATTTCCTTTTCGGTAGCAAATGATTCTATCAATGTGTCCCAGTCTATGAGCGATGGGGAGACCTTGGTGTCAAAAGGTGGAAAGTTTGAACTTGGGTTTTTCAGCCCAGGTAGTTCACAGAAACGTTATCTGGGAATTTGGTATAAGAATATCCCAATCCAGACAATTGTTTGGGTTGCTAATAGGGCCAACCCCATCAATGATTCCTCAGGCATCTTAACAGTGAACAGCAAAGGCAATCTTGTTCTCAGCCAAAATGGGTCTCTTGTTTGGTTCACCAACTCTCAGAAAAAAGCACAGAATCCGGTGGCAGAGCTCATGGACAGTGGCAATTTGGTGATAAGAAATGAGGGAGAAGCAAACCCAGAAGCATACTTGTGGCAAAGCTTTGACCATCCATCTGATACACTCTTGCCAGGGATGAAGTTGGGATGGGACCTCCGAACTGGTCTGCAAAGAAACCTATCTTCTTGGAAGAGTCCAGATGATCCATCCCCAGGAGACGTTTATCGGATCCTAGAACTCTATAACTATCCTGATATTTATACATTGAAGGGAACACAAAAGGTGTTTCGGAATGGACCTTGGAATGGCCTATATTTTAGTGGAGTACCAGAGCTACAGAATAACAACATTTATGACTTAAATTTTGTCAGCAATAAGGATGAGATTTACTATACCTTTAGCCTTGTAAATAATTTTGTCATATCCAGAATTGTAATAAACCAAACAGGTACAGGTATTCGCTATGTCTGGGTGGAGAATGATAAAAATTGGGAGATATTGAAGCCACTTCCAAAAGACTTTTGTGACACTTACGGTCTCTGCGGAGTGTATGGGAATTGTATCATTACACAGACACGGGTGTGCCAATGTTTGAAAGGGTTTAGACCAAAGTCACCACAAGCATGGGCTTTATTTGACTGGAGTCAAGGATGTGTCCGCAATAAACCGTTAAGTTGCAAAGATAAAGACAAAGATGGGTTTGTCAAATTTGAAAGCCTCAAAGTTCCAGATACTACACATACTTGGTTGGATGAGACTATTGGTCTAGAGGAATGCAGAGCAAAGTGCTTGAATAATTGTTCTTGTATGGCTTATGCTAATTCAGACATAAGAGGTGCAGGTAGCGGTTGTGTCATGTGGTTTGGAGATCTCATTGACTTGAAACAATTTCAAACTGGAAAGCAAGATCTATATATCAGGATGCCTGCTTCAGAGTTAGGAACAAATTCGAGGAAGAACAAGAGTAAGAATGACGACATTGATTTACCAACATTTGATTTTTCATCCATCTATAAAGCAACAAATCACTTTTCAGAAAGTAACAAATTGGGAGAAGGTGGCTTTGGACTAGTGTATAAGGGAAAATTAACAGAAGGGCAAGAGATTGCAGTTAAGAGACTTTCTAATTCTTCTGAGCAAGGTTTGGACGAGTTCATAAATGAAGTTATGTTGATCGCAAAACTTCAACACCGCAATCTTGTAAAGCTACTTGGCTGTTCTATTAAGGAAAATGAGAAGTTGTTAATTTATGAATTCATGCCCAACAGAAGCTTGGACTACTTCATTTTTGATTCAACAAGACGTAAATTATTAGGTTGGACTCAACGATTTGAGATTATTGGTGGAATTGCTCGAGGACTTCTCTATCTTCACCAAGATTCCAGATTAAAGATTATTCATAGGGATCTTAAAACTAGTAATGTTCTTCTTGATAGTAATATGAACCCAAAAATATCAGATTTTGGTATGGCTAGAATATTTGGTGGTTATATGCCTCCCGAATATGCTATGCATGGATATTTTTCTGACAAATCTGATGTCTTTAGCTTTGGTGTGATTGTGCTAGAGATCATTAGTGGGAGGAAGAATAGAGGATATTGTGATCCACGCCATCACTTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAGAAAAGCCCCATGGAACTTATAGATGACTTAGTGAATAATTTAGCTGATCCATATGAAATATCAAGATATATTCATATTGGTTTGTTATGTGTACAACAAAAACCAAAGGATAGACCAAACATGTTATCAGTTGTTTTAATGTTGAATGGTGAGAAGTTATTGCCAGAACCAAGTCAACCTGGGTTCTACACAGGAAAAGATCATCCAACCATGATAGATTCTTCTCCAGGAAATTTTGATATGTATTCCCTCAATGGAATGTCTAACTCACTGTTGGAGGCGAGATAA 2697 0.3878 MGMVFHIRMSCSGYMAPEYAVDGQFSVKSDVFSFGILVLEVICGRRNKGLYHADDSHNLVGYAWTIWKEGRALELIDLKINESCIESEVLRCLHISLLCVQQYPEDRPTMASVILMLGSEIELVEPKEPGFVCRKVSVDADSHSNQKDTISTNEVTISFSVANDSINVSQSMSDGETLVSKGGKFELGFFSPGSSQKRYLGIWYKNIPIQTIVWVANRANPINDSSGILTVNSKGNLVLSQNGSLVWFTNSQKKAQNPVAELMDSGNLVIRNEGEANPEAYLWQSFDHPSDTLLPGMKLGWDLRTGLQRNLSSWKSPDDPSPGDVYRILELYNYPDIYTLKGTQKVFRNGPWNGLYFSGVPELQNNNIYDLNFVSNKDEIYYTFSLVNNFVISRIVINQTGTGIRYVWVENDKNWEILKPLPKDFCDTYGLCGVYGNCIITQTRVCQCLKGFRPKSPQAWALFDWSQGCVRNKPLSCKDKDKDGFVKFESLKVPDTTHTWLDETIGLEECRAKCLNNCSCMAYANSDIRGAGSGCVMWFGDLIDLKQFQTGKQDLYIRMPASELGTNSRKNKSKNDDIDLPTFDFSSIYKATNHFSESNKLGEGGFGLVYKGKLTEGQEIAVKRLSNSSEQGLDEFINEVMLIAKLQHRNLVKLLGCSIKENEKLLIYEFMPNRSLDYFIFDSTRRKLLGWTQRFEIIGGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSNMNPKISDFGMARIFGGYMPPEYAMHGYFSDKSDVFSFGVIVLEIISGRKNRGYCDPRHHLNLLGHAWRLWIEKSPMELIDDLVNNLADPYEISRYIHIGLLCVQQKPKDRPNMLSVVLMLNGEKLLPEPSQPGFYTGKDHPTMIDSSPGNFDMYSLNGMSNSLLEAR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13976g00002 898 Pfam S-locus glycoprotein domain 347 456 IPR000858 GO:0048544
Mupr13976g00002 898 SUPERFAMILY Protein kinase-like (PK-like) 578 851 IPR011009 -
Mupr13976g00002 898 Pfam D-mannose binding lectin 211 315 IPR001480 -
Mupr13976g00002 898 CDD PAN_AP_plant 474 560 - -
Mupr13976g00002 898 SUPERFAMILY alpha-D-mannose-specific plant lectins 212 320 IPR036426 -
Mupr13976g00002 898 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 159 286 - -
Mupr13976g00002 898 CDD STKc_IRAK 601 853 - -
Mupr13976g00002 898 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Mupr13976g00002 898 SMART ntp_6 480 559 IPR003609 -
Mupr13976g00002 898 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 4 122 - -
Mupr13976g00002 898 ProSiteProfiles Protein kinase domain profile. 595 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13976g00002 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Mupr13976g00002 898 SUPERFAMILY Protein kinase-like (PK-like) 11 126 IPR011009 -
Mupr13976g00002 898 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 561 670 - -
Mupr13976g00002 898 Pfam Protein tyrosine and serine/threonine kinase 13 114 IPR001245 GO:0004672|GO:0006468
Mupr13976g00002 898 Pfam Protein tyrosine and serine/threonine kinase 598 848 IPR001245 GO:0004672|GO:0006468
Mupr13976g00002 898 SMART blect_4 169 289 IPR001480 -
Mupr13976g00002 898 Gene3D Hepatocyte Growth Factor 477 557 - -
Mupr13976g00002 898 Gene3D - 158 286 IPR036426 -
Mupr13976g00002 898 ProSiteProfiles Bulb-type lectin domain profile. 163 283 IPR001480 -
Mupr13976g00002 898 CDD B_lectin 169 289 IPR001480 -
Mupr13976g00002 898 Pfam PAN-like domain 477 545 IPR003609 -
Mupr13976g00002 898 SMART serkin_6 595 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13976g00002 898 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 671 859 - -
Mupr13976g00002 898 Gene3D Phosphorylase Kinase; domain 1 568 670 - -
Mupr13976g00002 898 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 476 559 - -
Mupr13976g00002 898 Gene3D Transferase(Phosphotransferase) domain 1 6 127 - -
Mupr13976g00002 898 Gene3D Transferase(Phosphotransferase) domain 1 671 857 - -
Mupr13976g00002 898 ProSiteProfiles PAN/Apple domain profile. 477 561 IPR003609 -
Mupr13976g00002 898 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 159 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13976g00002 Mupr-Chr13976 7199 20693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13976g00002 552 890 Receptor kinase-like Gene Family AT4G23140 50.000 8.11e-113 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13976g00002 PK_Tyr_Ser-Thr 7.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13976g00002 - - gmx:100801916 1177.93