Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13976g00001 ATGGACATCCTTTCCATCTTGATTATGGTTGCTTGTATAATTGTTCCCTCCCTCAAAATTTCCATAGCAAATGATTCTATCAACATGCTCCAGTCCATGAGTGATGGGGAGACCTTGGTGTCAACAGGTGGAAAGTATGAACTTGGGTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTACCTGGGCATTTGGTACAAGAATATCCCAATTCAGAAAGTTGTTTGGGTTGCTAATAGGGCCAACGCCATCAATGGTTCCTCAGGCATCCTAACAGTGAACAGCACAGGCAATCTTGTTCTCAGCCAAAATGGGTCTCTCGTTTGGTACACTAACTCTCAGAAGCAAGCACAGAATCCGGTGGTAAAGCTCTTAGAGAGTGGCAATCTTGTGATAAGAAATGAGGGAGAAACAGACCCAGAAACATACTTGTGGCAAAGCTTTGACCATCCATCTGATACACTCTTGCCAGGGATGAAGTATGGATGGGACCTCCGAACCGGTTTGGAACGGAGATATACTGCTTGGAAGAGTCCAGATGATCCATCCCCAGGAGATGTTCATCGGGTTTTAAAACTCTATAACTATCCTGAGTTTTATACAATGAAGGGGGCACAAAAATTGTTCCGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGAACACCTGATCTACATAATAACACCGTTTTTAGCTTCAATTTTGTGAGCAATAAGGATGAGATTTACTACACCTATAGCCTCGCAAATAATCATGTCATCTCCATAAATGTAATAAACGAAACAGGTACGGTTTCTCGCTATGTATGGGTGGAGGCTGAACAAAATTGGAGGACGTATAGATCCTTCCCGAGTGAGTTTTGTGACACTTACGGCTTCTGTGGACCCTACGGGAACTGCGTAAGTACTCAATCCCAAGTCTGTCAATGTTTAAAAGGTTTCAGCCCAAAGTCATCACAAGAATGGAACTCATCGGATTGGACTCGAGGATGTGTCCGCAATAAACCGTTAAGTTGCAACGGTAAAGACAAAGATGGGTTTGTGAAATTTGAAGGCCTGAAAGTTCCAGATACTACACATACTTGGTTGGATGAGAGTATTGGTCTAGAGGAATGCAGAGATAAGTGTTTGAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAGAGGTGCAGGTAGCGGTTGTGCCATGTGGTTTGGAGATCTCATTGACTTGAAACAGCTTCAAGCTGGTGGCCAAGATCTATACATCAGGATGCCTGCTTCTGAGTTAGGTAAACTCAACGTCACTTTAACTTTTATCTTCTCATTTTTATTTCAACTTTTAAAACACAACCTCACTCTAAAACCCGTATATAGGCACAAGAAGAACACACCAACTATAGTTGCTTCCACGGTTGCTGCAATTTGTGGGGTTCTTTTACTAAGTACTTATTTGATTGGCAGAATCCGGAGGAACAATGCTGAGCATAGCAATGAAAGACATGTGGAAGATCTGGATATCCCATTGTTTGACTTTAAAACGATTACTGATGCCACTAATGGCTTCTCCACAGAAAATAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGATTATTGGTTGGTCGGAATGAAATTGCTGTGAAGAAACTATCTAGTAGCTCAGGACAAGGATTGACAGAGTTCTTAAATGAAGTAAAATTGATTGCGAAACTTCAGCATCGAAATCTAGTAAAACTTCTTGGCTGCTGCATTCAAGGACAAGAAAAAATGCTAGTATATGAATACATGCCAAACAGCAGCTTAGACTCCTTCATTTTTGATGATACAAAAGGTAAGTTACTAGAGTGGCCTCAGCGCTTTCACATAATCTGTGGAATTGCAAGGGGACTCATGTATCTTCATCAAGATTCCAGACTAAGGATTATCCATAGAGATCTCAAAGCAAGTAATGTTCTACTTGATGAAAATTTGAGTCCAAAAATATCAGATTTCGGAATGGCCAGAACTTTTGGAGTAAACCAGACCGAAGGAAACACAAATAGAGTAGTTGGAACTTAG 2049 0.4109 MDILSILIMVACIIVPSLKISIANDSINMLQSMSDGETLVSTGGKYELGFFSPGSSQKRYLGIWYKNIPIQKVVWVANRANAINGSSGILTVNSTGNLVLSQNGSLVWYTNSQKQAQNPVVKLLESGNLVIRNEGETDPETYLWQSFDHPSDTLLPGMKYGWDLRTGLERRYTAWKSPDDPSPGDVHRVLKLYNYPEFYTMKGAQKLFRFGPWNGLYFSGTPDLHNNTVFSFNFVSNKDEIYYTYSLANNHVISINVINETGTVSRYVWVEAEQNWRTYRSFPSEFCDTYGFCGPYGNCVSTQSQVCQCLKGFSPKSSQEWNSSDWTRGCVRNKPLSCNGKDKDGFVKFEGLKVPDTTHTWLDESIGLEECRDKCLNNCSCMAYTNSDIRGAGSGCAMWFGDLIDLKQLQAGGQDLYIRMPASELGKLNVTLTFIFSFLFQLLKHNLTLKPVYRHKKNTPTIVASTVAAICGVLLLSTYLIGRIRRNNAEHSNERHVEDLDIPLFDFKTITDATNGFSTENKIGEGGFGPVYRGLLVGRNEIAVKKLSSSSGQGLTEFLNEVKLIAKLQHRNLVKLLGCCIQGQEKMLVYEYMPNSSLDSFIFDDTKGKLLEWPQRFHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLSPKISDFGMARTFGVNQTEGNTNRVVGT 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13976g00001 682 Gene3D - 19 147 IPR036426 -
Mupr13976g00001 682 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Mupr13976g00001 682 Gene3D Transferase(Phosphotransferase) domain 1 593 682 - -
Mupr13976g00001 682 Pfam D-mannose binding lectin 73 176 IPR001480 -
Mupr13976g00001 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 593 682 - -
Mupr13976g00001 682 Pfam Protein tyrosine and serine/threonine kinase 519 668 IPR001245 GO:0004672|GO:0006468
Mupr13976g00001 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Mupr13976g00001 682 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Mupr13976g00001 682 SMART serkin_6 517 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13976g00001 682 Gene3D Hepatocyte Growth Factor 338 418 - -
Mupr13976g00001 682 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 676 - -
Mupr13976g00001 682 Pfam PAN-like domain 338 406 IPR003609 -
Mupr13976g00001 682 SMART ntp_6 341 420 IPR003609 -
Mupr13976g00001 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 592 - -
Mupr13976g00001 682 SMART blect_4 30 150 IPR001480 -
Mupr13976g00001 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 420 - -
Mupr13976g00001 682 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Mupr13976g00001 682 SUPERFAMILY Protein kinase-like (PK-like) 497 682 IPR011009 -
Mupr13976g00001 682 Gene3D Phosphorylase Kinase; domain 1 480 592 - -
Mupr13976g00001 682 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Mupr13976g00001 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Mupr13976g00001 682 ProSiteProfiles Protein kinase domain profile. 517 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13976g00001 682 CDD PAN_AP_plant 335 421 - -
Mupr13976g00001 682 CDD B_lectin 31 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13976g00001 Mupr-Chr13976 1964 7147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13976g00001 462 682 Receptor kinase-like Gene Family AT4G23190 53.778 3.35e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13976g00001 PK_Tyr_Ser-Thr 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13976g00001 - - gmx:100802962 1043.11