Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13962g00001 ATGGATTTGAAGTCCCCTCATGTTTCTCCTGTTCTCACTGACCCTATTCCTGTCAACAAGTCAAGGCTTGGAATGCATTCTAGTTTGTTAGCTTATTCACAACAAGACTCATCACTCTCTCCTGGGAAGTGCTCAAGAAGCAATTCAAGGAAAAGTGTCGATGATGTCAGGTCTAATGGTTGGTTGGATGCCATGAAGGCTTCTTCGCCTCCAAGGAAGAAGCTACTTAAAGGCTCTAGTGCTCAGGTTGCTTCCATCGACTATGACCTTGAAGACTACTATTCATGGATGCTTCAATATCCTTCAGCATTGAACTCGTTTGAGAAAATCATTGACCTTGCAAAGAATAAGAAGATTGCAATATTTCTAGATTATGATGGCACACTTTCACCAATAGTAGATGATCCGGATTGTGCCTTTATGTCCGAATCTATGCGCACAACTGTGAGAAGTGTGGCAAAATATTTCCCCACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATTTAGTTAAACTATCTGAACTCTACTACGCTGGTAGTCATGGTATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCCAAAACTGACCCAAATTGTGTTAAGTCTACTGACCATCAGGGAAAGGAGATAACTCTCTTTCAACCTGCAAGAGAATTCCTACCTATGATTGATGAGGTTTTTAGCACCCTCGTCGAGATTACTAAAGATATAAAAGGCGCAAACGTTGAAAATCACAAATTCTGCGCTTCTGTACATTACCGTAATGTAGAAGAGACTAATTGGACAACTATTGGACAACGTGTCCATGATGTCTTGAAAGATTACCCTCGTTTACGTTCAACACATGGACGGAAGGTTTTAGAAGTCCGTCCTGGGATTGATTGGAATAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTCTAGGGTTAACAGATAGGAATGATGTACTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGATTATTATGCTACAAATTTTGACGATTGCATTGAACCTGCTGCGAGAGGGCCATCGAGGTTGTGGGATTTTGGTTTCGTCGGCTAGGAAAGAAAGCAATGCCTTCTACTCTCTTCGAGACCCCAATGAGGTTCAGATCCCAGCACAGTTGATATGCAATTATTTTGTCTGA 1179 0.4105 MDLKSPHVSPVLTDPIPVNKSRLGMHSSLLAYSQQDSSLSPGKCSRSNSRKSVDDVRSNGWLDAMKASSPPRKKLLKGSSAQVASIDYDLEDYYSWMLQYPSALNSFEKIIDLAKNKKIAIFLDYDGTLSPIVDDPDCAFMSESMRTTVRSVAKYFPTAIISGRSRDKVFDLVKLSELYYAGSHGMDIIGPVSETLSKTDPNCVKSTDHQGKEITLFQPAREFLPMIDEVFSTLVEITKDIKGANVENHKFCASVHYRNVEETNWTTIGQRVHDVLKDYPRLRSTHGRKVLEVRPGIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDKTDEDAFKIIMLQILTIALNLLREGHRGCGILVSSARKESNAFYSLRDPNEVQIPAQLICNYFV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13962g00001 392 NCBIfam HAD-IIB family hydrolase 120 342 IPR006379 -
Mupr13962g00001 392 Gene3D - 218 386 IPR023214 -
Mupr13962g00001 392 Gene3D - 119 207 IPR023214 -
Mupr13962g00001 392 FunFam Trehalose 6-phosphate phosphatase RA3 119 259 - -
Mupr13962g00001 392 Pfam Trehalose-phosphatase 122 377 IPR003337 GO:0003824|GO:0005992
Mupr13962g00001 392 SUPERFAMILY HAD-like 120 381 IPR036412 -
Mupr13962g00001 392 CDD HAD_TPP 120 380 - -
Mupr13962g00001 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 381 IPR044651 GO:0004805|GO:0005992
Mupr13962g00001 392 MobiDBLite consensus disorder prediction 36 55 - -
Mupr13962g00001 392 NCBIfam trehalose-phosphatase 117 381 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13962g00001 Mupr-Chr13962 18836 21161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13962g00001 106 380 Trehalose Biosynthesis Gene Families AT1G70290 26.132 1.53e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13962g00001 K01087 - qsa:O6P43_024315 562.762