Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1394g00001 ATGGCGAAGCGCTTGATTCCCAGCTTCAATCGCGTTCTCATAGAGAAAATTGTTCCTCCCTCCAAGACCAGCGCTGGCATTCTCCTCCCTGAGAAATCCTCCCAGCTTAATTCGGGTAAGGTGATAGCCGTTGGACCCGGATCACGAGACAGGGTAGGGAACTTGATTCCGGTGGCCGTCAAAGAAGGCGACCACGTCCTCTTGCCGGAGTACGGTGGCACGCAAATCAAGCTCGATGATAAAGAGTTCCATTTGTTTAGGGATGAGGACATTTTGGGCATTCTGCCAATTCAGCTTAGCAATGAAAAAGCATTTCTTGAACATAGAAAACCACCAAGACAGAATGACGTGCGTAACAATTCAGTTGCTTTAGCCAAGGCAAACATGAGTGGAATCGAAGTTACATCAATACGTGAAAAATATAGAAGAATGCTAAGAACCGCGTGA 447 0.4698 MAKRLIPSFNRVLIEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDRVGNLIPVAVKEGDHVLLPEYGGTQIKLDDKEFHLFRDEDILGILPIQLSNEKAFLEHRKPPRQNDVRNNSVALAKANMSGIEVTSIREKYRRMLRTA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1394g00001 148 Gene3D GroES chaperonin 1 104 IPR037124 GO:0006457
Mupr1394g00001 148 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 FunFam 10 kDa chaperonin, mitochondrial 1 96 - -
Mupr1394g00001 148 SUPERFAMILY GroES-like 3 95 IPR011032 -
Mupr1394g00001 148 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr1394g00001 148 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1394g00001 Mupr-Chr1394 2649 3852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1394g00001 3 95 Calmodulin-binding Proteins AT5G20720 38.947 4.76e-11 57.0