Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13944g00001 ATGGAAAATAAAGATACGAACCAATATCATAGTTTTGTTGTTCAGAGTTCAATTGTTTTTTCCACCATCACCTGGCATACCATTCCAACAAACACCCCAATGGCTTCGAAGTCCTCAGCCATCAAGTACATGAGTTTTGCTCAAAGAAGAAGAAAAGCACATAGCACAAGAGAAGAAGGGTCATTAATGTCAGAGCAGGAAACCGATTCGTGGGGCTTCCTGTTGATAATTGATGCTGTTTTGTTAGCTGTCTTTCACGTTTACCGAGGTTGTGGTAAATTAGTTGCTGGGGATTCATTGGACACGGACAAACAAGTTCTGCTGAAGCTGAAATTGTACTTGCAAAGCCAAACTCGTACAAATAGAGGAGGGTACATAAACTGGAACAAGAACGGTTCAAATCCTTGTGAGGAGTGGTCAGGAATCTCGTGCAGCGTCTTGAACGGGACAACAAGGAGGGTTGTGAAAGTAGACATCTCTTACAGTGACATATATGGTAACATATTCCAGAACTTCTCTCAGCTCACCGAGCTCACACACCTTGACATCTCTTGGAACTCTCTCTCTGGGGGGATTCCTGAGGACTTGAGGAGGAGCCACAAGCTTGTGTATCTTAATCTCTCGCATAATACTCTTGATGGGGAGTTGGATTTGAGGGGCTTGACACAGTTGCAAACACTGGACTTGTCTCTTAACAGATTTGTTGGGGGGCTTGGGTTGAGTTTCCCTGCTATTTGTGACAGTTTGGTCACTTTGAATGTCTCAGACAATCAGTTGAGTGGCGGGGTTGATGGCTACTTTGACCAATGCTTGAGGTTGCAGTACTTGGATTTGAGCACCAACCATCTTGGTGGGGCCTTGTGGAGTGGATTTTCCAGGCTGAGGGAGTTTTCAGTGTCAGAGAATTATCTCACTGGGGCTGTTCCTTCCCAGGTTTTTCCAATTAATTGTAGCCTTGAAAAACTAGACCTTTCAGTAAATGGGTTTGGTGGTATTGCCCCCAAGGAGGTTGCTAACTGCAAGAATTTAGTGGTTCTCGACCTCTCTAGCAACAATTTCACTGGAGATATTCCCAAAGAAATTGGTTCCATTTCTGGCCTTGAGTCATTGTTCTTGGAGAACAACACTTTCTCAAGGGATATCCCAGAGACCCTTTTGAGCTTGACCAATTTGTTCATCTTGGATTTGAGCAGAAACGGATTTGGAGGGGAGGTGCAGGAGATTTTTGGGAAATTCAAGCAAGTGAAGTTTCTTTTGCTGCACTCAAATTCCTACTCTGGAGGGTTGATCACATCAGGCATTTTTGCTTTGACAAACCTTAGCCGCTTAGACATAAGTTACAATAACTTTTCAGGTCCATTACCTGTTGAAATCTCACAAATGTCTGGACTCACTTTCTTGACCTTAACCTACAACCAGTTCTCTGGGCCTATTCCATCTGAATTGGGAAAGTTGACTCGCCTCGTGGCACTTGATCTTGCCTTCAACAATTTCAGTGGACCAATCCCACCAAGTCTTGGAAACTTGAGTTCTCTCTTGTGGCTAACCCTTGCGGATAATTCATTAACGGGAAAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGTTGAACCTTGCAAACAACAAGCTCACTGGAAAGTTTCCTTCTGAACTAACAAGAATTGGAAGGAATGCAACGGCCACATTTGAATCAAATGATAAAAGTTCTGTTGGAGTTATTGCTGGCAATAGTGAGTGCTCAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCCTTTAGCTTTGTGTATACCATCCTAACAAGGAAGAATTGTAGGTCCCTTTGGGACAGGTTGCTCAAAGGATATGGTATTTTCCCCATGTGTACATCTGAGCCCTCTTCTAGATCATCACACATATCAGGGTATGTTCAGCTAAGTGGGAACCAGTTGAGTGGTGAAATCCCTTCAGAAATTGGGACCATGGTGAACTTCAGCATGTTGCATTTGGGGGATAACAAGTTCACTGGGAAATTCCCTCCGCAGATTGTAGATTTGCCACTTGTGGTCCTGAACATGACCAGAAACAATTTTTCTGGTGAAGTTTCAAGGGAAATTGGCAATATGAAGTGTCTACAGGATCTTGATTTGTCTTGGAACAATTTCTCTGGAACATTTCCCGTAAGTTTGGCACATTTGGATGAACTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTTCCACCAGTTGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCCTCTTGGACCTCCCAAAGTTCTTTAACATCTCTGATGATAGAAACAGAACTTTGCACAAAGTCTTGAAAAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGCGCTGGCCATCATGATCTGTGGACTTCTTTCCCTTGTAATATGTTTCTTGGTGAAAAGTCCATCGGTGGAACCAGGATACCTCATTAAGAATACAAAGAAGCAAGCACATGATTCAGGCAGCTCCGGATCCTTACCATGGGGTTCTGATACTGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGCAGACATCTTGGAAGCAACCTCCAACTTCTCAGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACAGTGTATAGAGGGTTGTTTCCAGATGGGAGAGAAGTGGCAGTAAAGAAGCTCCAAAGGGAAGGAATTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTCCTGAGTGGTCATGGATTTAACTGGCCTCATCCAAACCTTGTCACACTTTATGGTTGGTGCCTCTACGGTTCACAGAAGATACTTGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGATGTTGTGACTGATAGAAAAAGGTTGACATGGAGGAGGCGCCTAGAAGTGGCAATTGATGTGGCTAGGGCACTTGTCTATTTACACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCCAGTAATGTGTTGCTAGACAAGGATGGGAAGGCCAAGGTCACTGACTTTGGACTTGCTAGGATTGTTGATGTTGGAGACAGTCATGTGAGCACTATAGTGGCTGGCACAGTGGGGTATGTTGCTCCAGAATATGGACAAACATGGCATGCCACCACAAAAGGGGATGTGTACAGTTTTGGTGTGTTGGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTGGATGAAGGGGAAGAGTGTTTGGTGGAATGGATTAAGAGAGTTATGATGGGTTCTGGAAGACAAGGGTTGGGTCAATCTGTAACAGTTCTGTTGAAGGGTTGTGGAGTAGTAGAGGGTGCAAAGGAGATGGCTGAGTTGCTCCAAGTTGGAGTTAAGTGCACACGTGATGTACCACAGGCTAGGCCTAACATGAAGGAGGTTCTAGCTATGCTCATTAAGATATACATTCCCAATGGTGACTCAAATTATGGACACTTTGTGTAG 3489 0.4405 MENKDTNQYHSFVVQSSIVFSTITWHTIPTNTPMASKSSAIKYMSFAQRRRKAHSTREEGSLMSEQETDSWGFLLIIDAVLLAVFHVYRGCGKLVAGDSLDTDKQVLLKLKLYLQSQTRTNRGGYINWNKNGSNPCEEWSGISCSVLNGTTRRVVKVDISYSDIYGNIFQNFSQLTELTHLDISWNSLSGGIPEDLRRSHKLVYLNLSHNTLDGELDLRGLTQLQTLDLSLNRFVGGLGLSFPAICDSLVTLNVSDNQLSGGVDGYFDQCLRLQYLDLSTNHLGGALWSGFSRLREFSVSENYLTGAVPSQVFPINCSLEKLDLSVNGFGGIAPKEVANCKNLVVLDLSSNNFTGDIPKEIGSISGLESLFLENNTFSRDIPETLLSLTNLFILDLSRNGFGGEVQEIFGKFKQVKFLLLHSNSYSGGLITSGIFALTNLSRLDISYNNFSGPLPVEISQMSGLTFLTLTYNQFSGPIPSELGKLTRLVALDLAFNNFSGPIPPSLGNLSSLLWLTLADNSLTGKIPPELGNCSSMLWLNLANNKLTGKFPSELTRIGRNATATFESNDKSSVGVIAGNSECSAMKRWIPADYPPFSFVYTILTRKNCRSLWDRLLKGYGIFPMCTSEPSSRSSHISGYVQLSGNQLSGEIPSEIGTMVNFSMLHLGDNKFTGKFPPQIVDLPLVVLNMTRNNFSGEVSREIGNMKCLQDLDLSWNNFSGTFPVSLAHLDELSRFNISYNPLISGTVPPVGHLLTFDKDSYLGDPLLDLPKFFNISDDRNRTLHKVLKNPTKWSLVLALALAIMICGLLSLVICFLVKSPSVEPGYLIKNTKKQAHDSGSSGSLPWGSDTVKIFHLNKTVFTHADILEATSNFSEERVIGRGGYGTVYRGLFPDGREVAVKKLQREGIEGEKEFRAEMKVLSGHGFNWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEDVVTDRKRLTWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKDGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWHATTKGDVYSFGVLVMELATGRRAVDEGEECLVEWIKRVMMGSGRQGLGQSVTVLLKGCGVVEGAKEMAELLQVGVKCTRDVPQARPNMKEVLAMLIKIYIPNGDSNYGHFV 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13944g00001 1162 FunFam Leucine-rich repeat receptor protein kinase MSP1 836 952 - -
Mupr13944g00001 1162 SUPERFAMILY L domain-like 289 552 - -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 101 217 IPR032675 -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 633 774 IPR032675 -
Mupr13944g00001 1162 Pfam Protein kinase domain 874 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13944g00001 1162 ProSitePatterns Protein kinases ATP-binding region signature. 879 902 IPR017441 GO:0005524
Mupr13944g00001 1162 SUPERFAMILY L domain-like 133 355 - -
Mupr13944g00001 1162 SUPERFAMILY L domain-like 641 745 - -
Mupr13944g00001 1162 Pfam Leucine rich repeat 318 375 IPR001611 GO:0005515
Mupr13944g00001 1162 FunFam Putative LRR receptor-like serine/threonine-protein kinase 412 573 - -
Mupr13944g00001 1162 SUPERFAMILY Protein kinase-like (PK-like) 852 1147 IPR011009 -
Mupr13944g00001 1162 PANTHER UNNAMED PRODUCT 88 236 - -
Mupr13944g00001 1162 CDD STKc_IRAK 879 1149 - -
Mupr13944g00001 1162 SMART serkin_6 873 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13944g00001 1162 ProSiteProfiles Protein kinase domain profile. 873 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13944g00001 1162 SMART LRR_typ_2 437 461 IPR003591 -
Mupr13944g00001 1162 SMART LRR_typ_2 175 199 IPR003591 -
Mupr13944g00001 1162 SMART LRR_typ_2 364 388 IPR003591 -
Mupr13944g00001 1162 SMART LRR_typ_2 509 533 IPR003591 -
Mupr13944g00001 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 313 405 - -
Mupr13944g00001 1162 Pfam Leucine rich repeat N-terminal domain 101 145 IPR013210 -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 407 484 IPR032675 -
Mupr13944g00001 1162 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 953 1153 - -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 316 406 IPR032675 -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 218 315 IPR032675 -
Mupr13944g00001 1162 Gene3D Ribonuclease Inhibitor 485 572 IPR032675 -
Mupr13944g00001 1162 Gene3D Transferase(Phosphotransferase) domain 1 954 1156 - -
Mupr13944g00001 1162 Gene3D Phosphorylase Kinase; domain 1 845 952 - -
Mupr13944g00001 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Mupr13944g00001 1162 Pfam Leucine Rich Repeat 178 196 IPR001611 GO:0005515
Mupr13944g00001 1162 Pfam Leucine Rich repeat 199 215 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13944g00001 Mupr-Chr13944 4627 8462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13944g00001 272 748 Receptor kinase-like Gene Family AT1G55610 26.869 1.42e-23 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mupr13944g00001 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13944g00001 - - gmx:100781769 1870.51