Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13930g00005 GAAGCCTTTTGTACCACATTTCTTATTTGGAACATTTCCTTACCTGATCCTATTCCTCACCTTCCTCTTCAACGCTTCCCCAAGAAACTTCTGAACATGGCTGGCATTGCATTCGGACGCTTTGATGATTCTTTCAGTTTAGGCTCAATCAAAGCCTATATTGCTGAGTTCATCTCAACCTTGCTCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCCTATGGTAAGTTGACATCAGATGCAGCACTTGATCCTGCCGGGTTAGTAGCAGTTGCTGTTTGCCACGGTTTTGCTCTCTTCGTTGCAGTTTCAGTTGGTGCCAACATCTCTGGTGGCCATGTCAACCCTGCTGTGACTTTTGGATTGGCTCTTGGTGGCCACATCACCATCCTCACTGGCATCTTCTACTGGATTGCACAGCTTCTTGGCTCCATAGTGGCATGCTTTCTTCTCCACTATGTCACAGGAGGCTTGGCAATTCCAATCCACAGTGTGGCTTCCGGGGTTGGAGCTGTTCAAGGAGTTGTGACAGAGATCATCATCACATTTGGTTTGGTGTACACCGTGTATGCCACAGCTGCTGATCCCAAGAAGGGCTCATTGGGCATCATTGCACCCATTGCCATTGGTTTCATTGTTGGTGCCAACATCTTGGCTGCAGGCCCATTCTCTGGTGGGTCAATGAACCCAGCACGCTCCTTTGGGCCTGCAGTTGTTAGTGGTGACTTCCATGACAACTGGATCTACTGGGTTGGACCTCTCATTGGTGGTGGTTTGGCTGGCCTTATCTACGGCAATGTGTTCATTCGCTCTGATCATGCACCTCTTTCCATGTGCTGCAGTCAATGGTTGTTTAATTTGGTGAGAATTCAAGAGGTTGGTGGTGTGCACAAGTGCTTTATTGTCTCT 909 0.4807 EAFCTTFLIWNISLPDPIPHLPLQRFPKKLLNMAGIAFGRFDDSFSLGSIKAYIAEFISTLLFVFAGVGSAIAYGKLTSDAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGIFYWIAQLLGSIVACFLLHYVTGGLAIPIHSVASGVGAVQGVVTEIIITFGLVYTVYATAADPKKGSLGIIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYGNVFIRSDHAPLSMCCSQWLFNLVRIQEVGGVHKCFIVS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13930g00005 303 PANTHER AQUAPORIN-8 36 273 IPR034294 -
Mupr13930g00005 303 Gene3D Glycerol uptake facilitator protein. 33 278 IPR023271 -
Mupr13930g00005 303 NCBIfam MIP family channel protein 55 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 FunFam Probable aquaporin TIP1-1 34 279 - -
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 95 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 132 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 ProSitePatterns MIP family signature. 113 121 IPR022357 -
Mupr13930g00005 303 CDD MIP 51 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 Pfam Major intrinsic protein 47 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13930g00005 303 SUPERFAMILY Aquaporin-like 45 274 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13930g00005 Mupr-Chr13930 25341 27217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13930g00005 33 277 Major Intrinsic Protein MIP AT3G16240 82.114 7.63e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13930g00005 K09873 - gmx:100803901 447.588