Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13929g00002 ATGGGAAAGAGAAAAGGAAGGTCTGCGCAAGAAACCCTCCGTCGTAGACTTGAATCGTGCAAGTCCACATACTCTACCGTCGATGAATTCGTCAGACATCTCCGTTCAACTTACCCCGATTACCAACGCACCAAGCACCAAACCCTAATTCGATTAGTTGGGGATGCTCTCCAGGCCATCAAGAAGCCCAACCATTGCGACGATGACGACCACGAAGGAGACTCTCGAACCGCGTCTCCAAAGCGCCGGAAGAAAATCGACGAGAGTGAAGAGAGACTGCAAAGGATGGAAACGTTGCACGTCGGAAGGAGGGCGCAGAGCGGTTCTCCGGCGCCGTCCTCCACTACGGAGAGCGACCGGGAAGTAACCGTGTCCACGTTGGAGGACGCAATTTTCGAGAAGAGGGTGGAACCTGAGTTCGATTTGATAAAGACAATGCTGCGCAAGACCTATACGCAGAAGAAGGTTGGGGTGGCGGAGGAAAAGATCGTTGAATTGGAGGTGGGGAGAAGCAGAAGCAATAAGGCTGTTGCGAACGAAGAAAGGAAGGAAATGAGGGCATCGGTTTCGGGTGGTGAGGTGAACGAGAAGGCTGGACCTATGTTTAGGGATTTTGGTGGGATGAAAGAGGTTTTGGAGGAATTGAAGATGGGAGTGTTTTTGCCTTTGTGCCATCCCCAATTGCCTAAGGATTTAGGTGTGAGGCCAATAGCTGGCATTTTGCTGTATGGACCACCTGGCTGTGGGAAGACTAGACTTGCCCGTGCTATAGCTAATGAGTGTGCTCTTCCTTTCTATGAAATTTCAGCTACTGAGGTGGTTTCTGGAGTCTCAGGTGAATCGGAAGAAAATATTAGAGAGCTTTTCTTTAAAGCATACAGGACTGCTCCGTGTATCGTCTTTATTGATGAGATTGATGCAATTGCTTCGAAGAGAGAGAATTTACAACGTGAGATGGATAAGCGAATTGTGGCGCAATTAATTACTTGCATGGATCAATCAAATATGCCTGGTCATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTATTGACCCTGCCCTGAGAAGGCCCGGTCGGTTTGATCGCGAGATTTTGATTGGCTATCCCGATGAATCTGCGAGGGAGGAGATCCTTTCTGTGCTTTTTTACAATCTCAAAACTGTGGGTTTATTTGATCTACGGAAATTAGCCAGGGCTACACCAGGATTTGTTGGTGCTGATTTGGAAGCTCTGGTTAACATGGCTGGCAATCTGGCAATGAGGAACATAATTGATGAAAGGAAACGTGAATTATCTCAAAACTGGTGGACGGAATCTTTATCATCCGAGGAAACAGATAAGCTTGCCATCAAAATGTCCGATTTTGAGGAAGCACTCAAGGTGGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTTCCATTCCCAATGTAAAATGGGAAGACGTCGGAGGGCTTCATCTTTTAAGGAAGGAGTTTGAACGTTTCATTGTAAGGCGTATAAAATATCCTGAATATTATGAGGGGCTTGGGGTGCGTATCGAGACTGGATTTTTGCTTTATGGACCTCCTGGATGTGGTAAAACATTGATTGCCAAAGCTGTTGCCACCGAGGCAGGTGCTAGTTTTATTCATATTAAGGGACCTGAACTTTTAAATAAATATGTTGGAGAAAGTGAGCTTGCAGTTCGTACATTGTTTAGCCGTGCAAGGACATGTGCACCTTGTATACTTTTTTTTGATGAGGTGGATGCTTTGACAACAAAACGTGGTAAGGAAGGTGTTGGGGTTATCAAGGGACTATTGAACCAGTTGCTTATTGAGTTAGATGGTGCAGAGCAACGACGGGGTGTGTTTGTGATTGGTGCCACAAATAGGCCTGAGGTGATGGATCCTGCTGTCCTACGGCCTGGTAGGCTTGGTAAACTTCTTTATGTTCCACTTCCAAGCGCAGACGAGCGAGTTTTGATACTGAAAACTCTTGCAAGAGGGATGCATATTGACGCCTCTGTGGATTTGAGTGTCATAGGAAAAATGGAAGCATGTGAAAGCTTTAGTGGGGCCGATCTTGCTGCATTGATGACTGAAGCAGCAATGGCTGCTCTTGATGAGAAATTGACCTCGACCGAGACAACTTGCGGTGCATCGCCCATCAAGATAAATCATTTTGAGGTTGCACTGAGTAAAGTCTCTCCCTCTGTGTCGGACAGTGAAAAGCAGTACTATCAACACTTGTCAGAGAGCTTTAAAGCAGCATGA 2262 0.4633 MGKRKGRSAQETLRRRLESCKSTYSTVDEFVRHLRSTYPDYQRTKHQTLIRLVGDALQAIKKPNHCDDDDHEGDSRTASPKRRKKIDESEERLQRMETLHVGRRAQSGSPAPSSTTESDREVTVSTLEDAIFEKRVEPEFDLIKTMLRKTYTQKKVGVAEEKIVELEVGRSRSNKAVANEERKEMRASVSGGEVNEKAGPMFRDFGGMKEVLEELKMGVFLPLCHPQLPKDLGVRPIAGILLYGPPGCGKTRLARAIANECALPFYEISATEVVSGVSGESEENIRELFFKAYRTAPCIVFIDEIDAIASKRENLQREMDKRIVAQLITCMDQSNMPGHVLVIGATNRPDAIDPALRRPGRFDREILIGYPDESAREEILSVLFYNLKTVGLFDLRKLARATPGFVGADLEALVNMAGNLAMRNIIDERKRELSQNWWTESLSSEETDKLAIKMSDFEEALKVVQPSSRREGFSSIPNVKWEDVGGLHLLRKEFERFIVRRIKYPEYYEGLGVRIETGFLLYGPPGCGKTLIAKAVATEAGASFIHIKGPELLNKYVGESELAVRTLFSRARTCAPCILFFDEVDALTTKRGKEGVGVIKGLLNQLLIELDGAEQRRGVFVIGATNRPEVMDPAVLRPGRLGKLLYVPLPSADERVLILKTLARGMHIDASVDLSVIGKMEACESFSGADLAALMTEAAMAALDEKLTSTETTCGASPIKINHFEVALSKVSPSVSDSEKQYYQHLSESFKAA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13929g00002 753 Gene3D - 371 471 - -
Mupr13929g00002 753 Gene3D - 477 743 IPR027417 -
Mupr13929g00002 753 Gene3D - 189 369 IPR027417 -
Mupr13929g00002 753 SMART AAA_5 515 651 IPR003593 GO:0016887
Mupr13929g00002 753 SMART AAA_5 236 372 IPR003593 GO:0016887
Mupr13929g00002 753 Pfam AAA+ lid domain 393 428 IPR041569 -
Mupr13929g00002 753 Pfam AAA+ lid domain 671 709 IPR041569 -
Mupr13929g00002 753 FunFam Ribosome biogenesis ATPase RIX7 191 369 - -
Mupr13929g00002 753 FunFam ATPase, AAA family protein 477 656 - -
Mupr13929g00002 753 ProSitePatterns AAA-protein family signature. 340 358 IPR003960 GO:0005524|GO:0016887
Mupr13929g00002 753 ProSitePatterns AAA-protein family signature. 619 637 IPR003960 GO:0005524|GO:0016887
Mupr13929g00002 753 Pfam ATPase family associated with various cellular activities (AAA) 240 369 IPR003959 GO:0005524|GO:0016887
Mupr13929g00002 753 Pfam ATPase family associated with various cellular activities (AAA) 520 648 IPR003959 GO:0005524|GO:0016887
Mupr13929g00002 753 Gene3D - 650 729 - -
Mupr13929g00002 753 PANTHER AAA-FAMILY ATPASE 148 751 - -
Mupr13929g00002 753 MobiDBLite consensus disorder prediction 107 121 - -
Mupr13929g00002 753 MobiDBLite consensus disorder prediction 62 99 - -
Mupr13929g00002 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 750 IPR027417 -
Mupr13929g00002 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 467 IPR027417 -
Mupr13929g00002 753 MobiDBLite consensus disorder prediction 62 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13929g00002 Mupr-Chr13929 6917 11370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13929g00002 450 751 Calmodulin-binding Proteins AT3G56690 43.421 3.75e-69 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13929g00002 K14571 - gmx:100809594 1086.25