Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13922g00001 ATGAATTTGGGGTTTGGGTCAAATGGGTCTCATTTTTCTGAGAATCTAGGGAAAAAGCTTGCATCTTTGACTCCAAAACTTGCAGAGAAGAGGGAGATTCACCATAATACCTCACAACCATGGAAGTTTCAATCAGAAGAAAATAAATTGTCTATGGAGAAAAATAAGAAAAGAAGGCTCAAAACACCTGCCCAGCTTATGGCATTGGAAAATTTTTACAATGATCACAAATATCTCACAGAGGAAATGAAATCAGAACTGGCTGATGAGTTAGAGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAAATTGTTGAATGATGAAGTGTGTGCTAATGGACGGCAAGATCGTTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGTCTAGGGCAGGATTCATGTGGAAGCACTAAACATGGTGATTATAGGCATCTAGATCCCAAAGAGGTTGAGAGTCATGGCCTTTATAACCATGAATTTTCGGCTGCAGATATGAACTATGGACACAGGAACCATCATTATACAGAAAATGATAGTGCAACAGATAGCACATCATCTGAGAGTAGCTCATCTTTGCAAGACCGATCGCTTCCTCAAGGAAAGGATCCATATGATATGGAGCCTTCTAGTCATCTAACACCTAATGGATCTCTTCCACCCCTAAATCCCAAGGGTGCAAATAACATGGTGTATAAGCCATCAGGATATTTGAAAGTGAAGGGAGAGATAGAACATGCTGCTATAACTGCAGTTAAAAAGCAATTAGGAAGCCATTATCGGGAAGATGGTCCACTACTTACTGTTGAATTTGATACAATTCCCCCTGAGGCTTTTGAATGTCAAATTCCAGATCTAGCTAATGAAGCATACCATGTCGCAAATCCTGCCCTTCCAAATTCTCCAGAAGTCTCTGCTGTGAAAAAGCAATCCAGTCTTAGCTCTAGACATGATTCATATCTTACCAAGTTAAGTTCCCAAGATTCACATATGGAAGGAGGTGACTTTGGCTCCTTGCATGATTCTGATTTCCAGGATAAGAAACCCCACCAGAATATAAATCAAAGGCCAACTTTTCACAGTTCTATCAATCCTCTACCTCGCAAGAACTCTTCCCTGGATTTGTATGTAGACTCTACTGGGGAAGCATCTGCATATAACAGCACTAAAAACCGTAGGATTGGTACTAAGCGTGGTTTTGAGGGGATGAGATGTGATTCTGCTTCTAACCCTAGTGATCACTATGAAGAGAATAACTTTGCGGTTAAGCAGACGGATTCACTGCTACATGCCTTCGATAACAGCAATCTGAAGAATGTACGAAGCAGTGAATATGTGAAATCTAAGCCTTCAAAGTCAATACATAAGTCTCAAATTTACTTGGATACTGAAGAAAGAAGGCTTAATAAAAAGATGGCAAAGGAAGAAAAGTTTAATGGGGATAGAAAGGTAAAAAAACAATATCGTGATCCAGATGGAGTTAGGGTGCTTTCAAATGAAATGATGGTTGCAAAGCGAGCTAAAGTTGATCCACTTGAACAATATGATGTTAAACAAGCACCTGTTGCTGAGCTGGTACCAAGGAAAAGTCAAAGGTCAGCTGCAGAGATGCCATCTAGCTTTAGTGAGGATGAGACTGCTGAAACCAGTTCCTCAATGGATTAA 1686 0.4015 MNLGFGSNGSHFSENLGKKLASLTPKLAEKREIHHNTSQPWKFQSEENKLSMEKNKKRRLKTPAQLMALENFYNDHKYLTEEMKSELADELELTEKQISGWFCHRRLKDKKLLNDEVCANGRQDRSSGVIQDRGSGLGQDSCGSTKHGDYRHLDPKEVESHGLYNHEFSAADMNYGHRNHHYTENDSATDSTSSESSSSLQDRSLPQGKDPYDMEPSSHLTPNGSLPPLNPKGANNMVYKPSGYLKVKGEIEHAAITAVKKQLGSHYREDGPLLTVEFDTIPPEAFECQIPDLANEAYHVANPALPNSPEVSAVKKQSSLSSRHDSYLTKLSSQDSHMEGGDFGSLHDSDFQDKKPHQNINQRPTFHSSINPLPRKNSSLDLYVDSTGEASAYNSTKNRRIGTKRGFEGMRCDSASNPSDHYEENNFAVKQTDSLLHAFDNSNLKNVRSSEYVKSKPSKSIHKSQIYLDTEERRLNKKMAKEEKFNGDRKVKKQYRDPDGVRVLSNEMMVAKRAKVDPLEQYDVKQAPVAELVPRKSQRSAAEMPSSFSEDETAETSSSMD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 317 374 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 186 205 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 540 561 - -
Mupr13922g00001 561 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 42 561 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 317 339 - -
Mupr13922g00001 561 SMART HOX_1 54 116 IPR001356 GO:0003677
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 125 152 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 125 142 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 341 357 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 177 234 - -
Mupr13922g00001 561 SUPERFAMILY Homeodomain-like 54 117 IPR009057 -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 531 561 - -
Mupr13922g00001 561 CDD homeodomain 56 111 IPR001356 GO:0003677
Mupr13922g00001 561 Gene3D - 44 127 - -
Mupr13922g00001 561 MobiDBLite consensus disorder prediction 358 374 - -
Mupr13922g00001 561 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Mupr13922g00001 561 Pfam Homeodomain 56 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13922g00001 Mupr-Chr13922 2058 8078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13922g00001 48 561 Homeobox Transcription Factor Family AT4G03250 39.888 3.77e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr13922g00001 Homeodomain 5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13922g00001 - - gmx:100812697 872.848