LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1391g00001	ATGAGTAACAGGCATATTGGTAATGGCAGTCTTATGTTGTGCTATGCAATGGTAACTGTTTTATTCCTCCCTCGTACGAATCCACTATCGTTTAGCTACCCCAAGTTTAGGAAAAATGATGTAGGACTGAAGCTAGAAGGAGATGCAGAAGTGTCACGTTCAGAAATCCAAGTCACACTGAGCAGGATAGGCCAAAGCAACAGTTACAGTGTTGGACGCGTCACACCTCTTCAAAACGTGCACCTCTGGGATATGAGCTCTGGGAAACTTACAGATTTCACTACCAAATTTTCCTTCTCTATTTTTTCTAATAACTATGAGTATGGAGATGGTTTGGCATTCTTCTTGGCAGATCCAGGGCTTCCCATTTTAAATAACATTAGAGAAGGAGGTGGTCTTGGCCTTGTGGATGGTGACCAAGTGTTGAACTCAACTCAGCACTCCTTTGTGGCAGTGGAGTTTGACACCTTCAAGAATCCGTGGGACCCTCCAGGCCTTCATGTAGGTATGAATTTCAACTCTATGAAGTCTAACATAACTGCACCTTGGTTGGCTGATATGTCACCAAGTAATATTCAAAATTGTACCATTGAGTACAATTCCACCACTCTTGCTTTTACGGTTTCTTTTGATGGCTACAGTGACAGTTATGGTTCTCCAATAGAATATAGTATTTCACAAAAAATTGATTTGAGAGATCACTTACCAGAGAGGGTTATGGTTGGATTCTCGGCAGCCACGGGAAGTTTGTCTGAGGTGCATATTCTGAAGTCATGGTCATTTAGTTCAAGCTTAGAAATTGGTGATGATGGTGGTGATAATAAACTGGCTGAGGGCCTAGGAATTGGAATGGGTTTGGCTGTGGTTTTGTTAGGATTGGCTTGTTTTCTGTGGTGGAAAAGGTTTAAAGGAAAGGAAGAGGAAGTCTTAGAATTTGATGTGAAAATGGACTATGAATTCCAAAAGGGCATTGGACCCAAGAGGTATGGCTACAATGAACTGGAAAGTGCAACAAGTAAATTTGCAGAGTCAGAGAAGCTTGGACAAGGTGGTTTTGGCGGCGTGTATAAAGGTTTTCTGAAAGATTTAAACTCGTATGTTGCTATCAAGAGGGTATCAAGAGAGTCCAAGCAAGGGGTTAAGGAATATGCAACTGAAGTCAAGATCATTAGCCAATTGAGGCACAAGAATTTGGTGCAACTCCTTGGTTGGTGCCATAGGAAAAATGATCTCCTTCTCGTATATGAATTCATGCCAAATGGAAGCTTAGATTTCCATTTATATGGTGGGAAAGGCTTCTTGACATGGCCAGTAAGGTACAACATAGCTCTAGGCTTGGCTTCTGCATTGCTATATCTGCAAGAAGAGTGGGAACAATGTGTTCTTCATAGGGACATCAAATCAAGCAACATAATGTTGGATTCAAGTTTCAATGCTAAGCTTGGTGATTTTGGTTTGGCTAGGTTGGTGGATCATGAGAAAGGGTCACAAACTACACTTATAGCTGGGACCAGGGGGTACATTGCCCCAGAATATGTCACCACAGGCAAAGCTTCTAAGGAATCTGACATATACAGCTTTGGGGTTGTTTTGTTAGAGCTAGCTAGTGGAAGAAAACCCATTAACCTAAAAGCTGAGGAGGGTCAAGTAACAATAGTTGAGTGGGTTTGGGAGCTCTATGAATTGGGAGAGCTACATAAAGTAGCAGACCCAAAGCTATGTGGAGCATTTGATGAGAAGCAAATGGAAAGGTTAGTGGCTATAGGCCTTTATTGTGCTCATCCAAGTTACAGATTCAGGCCTTCTGTGATGCAAGTGATCCAAATGCTTAAATTTGAAGCTGAATTGCCAATTCTGCCAAACTGGATGCCTGTCACAGACTACTTTCCTTTAACAACAGCAGCAATTCTTTCATCTGTTTCAAGCAATGTATCATACTCAGTGGAATAG	1950	0.4174	MSNRHIGNGSLMLCYAMVTVLFLPRTNPLSFSYPKFRKNDVGLKLEGDAEVSRSEIQVTLSRIGQSNSYSVGRVTPLQNVHLWDMSSGKLTDFTTKFSFSIFSNNYEYGDGLAFFLADPGLPILNNIREGGGLGLVDGDQVLNSTQHSFVAVEFDTFKNPWDPPGLHVGMNFNSMKSNITAPWLADMSPSNIQNCTIEYNSTTLAFTVSFDGYSDSYGSPIEYSISQKIDLRDHLPERVMVGFSAATGSLSEVHILKSWSFSSSLEIGDDGGDNKLAEGLGIGMGLAVVLLGLACFLWWKRFKGKEEEVLEFDVKMDYEFQKGIGPKRYGYNELESATSKFAESEKLGQGGFGGVYKGFLKDLNSYVAIKRVSRESKQGVKEYATEVKIISQLRHKNLVQLLGWCHRKNDLLLVYEFMPNGSLDFHLYGGKGFLTWPVRYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTLIAGTRGYIAPEYVTTGKASKESDIYSFGVVLLELASGRKPINLKAEEGQVTIVEWVWELYELGELHKVADPKLCGAFDEKQMERLVAIGLYCAHPSYRFRPSVMQVIQMLKFEAELPILPNWMPVTDYFPLTTAAILSSVSSNVSYSVE	649

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr1391g00001	649	FunFam	L-type lectin-domain containing receptor kinase IX.1	326	417	-	-
	Mupr1391g00001	649	Gene3D	Transferase(Phosphotransferase) domain 1	418	630	-	-
	Mupr1391g00001	649	SMART	serkin_6	341	597	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1391g00001	649	ProSitePatterns	Legume lectins alpha-chain signature.	235	244	IPR000985	-
	Mupr1391g00001	649	Pfam	Protein kinase domain	342	549	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1391g00001	649	CDD	STKc_IRAK	347	611	-	-
	Mupr1391g00001	649	SUPERFAMILY	Protein kinase-like (PK-like)	326	637	IPR011009	-
	Mupr1391g00001	649	SUPERFAMILY	Concanavalin A-like lectins/glucanases	29	267	IPR013320	-
	Mupr1391g00001	649	ProSitePatterns	Protein kinases ATP-binding region signature.	347	370	IPR017441	GO:0005524
	Mupr1391g00001	649	ProSitePatterns	Legume lectins beta-chain signature.	150	156	IPR019825	-
	Mupr1391g00001	649	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	461	473	IPR008271	GO:0004672\|GO:0006468
	Mupr1391g00001	649	PANTHER	-	62	614	-	-
	Mupr1391g00001	649	ProSiteProfiles	Protein kinase domain profile.	341	597	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1391g00001	649	Gene3D	-	27	276	-	-
	Mupr1391g00001	649	FunFam	Lectin-domain containing receptor kinase A4.3	418	630	-	-
	Mupr1391g00001	649	Pfam	Legume lectin domain	29	270	IPR001220	GO:0030246
	Mupr1391g00001	649	CDD	lectin_legume_LecRK_Arcelin_ConA	29	265	IPR001220	GO:0030246
	Mupr1391g00001	649	Gene3D	Phosphorylase Kinase; domain 1	326	417	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1391g00001	Mupr-Chr1391	3652	5601	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1391g00001	20	628	Receptor kinase-like Gene Family	AT5G10530	47.695	2.01e-176	515

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mupr1391g00001		Pkinase	1.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1391g00001	-		-	gmx:100780181	821.617