Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13915g00001 ATGGATGGTCTAAGTTGGGATGCCTCATCACAACTTGTTGCTAACATACCGATCTTGTGGAGCACTCAGCCTCAAGACCTTGAAGGAGATCACTACCAGTCCTTCATGCCCCACCCAAGTTCAAGTGTCCTCAACCAAACATGCTATCCATATCCCAGTTCTGAAAAAGTGAGGGACATGGTTGAGTCATCCACAACTTGTGAGATAACGAGTATGATGCCAAACACAAACCTGCCACAAAGAATAGCAGCCATGCCTGTGAAATCAGGAGCAGCTGGAGCCAGTTGGGAAGAAGCTTTAACATCCCAATCATGCCCGTCCCTTTCGGTGAATACGAACCAAACTAGCAATTATGAGGCAGATTTCAACATGGCCCACCAGCAACAACACCTTATCAGTGGCAAGGCTACCTGCTCTCTTGAGTCACTTGATTGCTTGCTTTCAGCTAATAATAATAGCAACACAGACACGTCTGTCGAAGATGATGGGATTTCCATGATGATCTTATCTGACTGCAGAAACTTGTGGAATTTCAGTTATGGCAGTGCAGTTTCCTCTGGTGAATCTGAGAGCGACATGCGGTATCCAGTCAATGAGCTGGATGAAACAGTGTCTCGAAGTTTCTCTGATCAATATCTCAGTCAAGGAAGAGTTGTAGATTCTGAAGTTATTTGCACAAAAACGAGCAGTTCCTGCTTCAGCATTGGTCAGAATTCTTCTTCTGCCACTGAAGGTGGTTTCAGGCTTATCTCAGAGACTTCACCGAAGTCCAAGAAAGCCAGATGTGATCATAGGCATCCTCGTTCTTCAAATATCAACTTCCAGCAGCCAAATTCATGTGTGTCAGCTTCCTTTGAAGAACCTGATCCTGAGGCCATAGCACAAATGAAGGAAATGATATATAGGGCTGCAGCTTTTAGGCCAGTGAACTTGGGCCTGGAAGTAGTGGAAAAGCCTAAAAGGAAGAATGTTAGGATATCAACTGATCCACAGACTGTCGCTGCCAGGCAAAGAAGAGAGAGAATAAGTGAGAGGATTAGGGTTTTGCAGAAGATTGTGCCTGGTGGAAGCAAGATGGACACTGCATCAATGCTTGATGAAGCTGCAAACTACCTCAAGTTTCTCAGGTCACAAGTCAAAGCACTAGAAAATCTAGGTCACAAGCTTGACACAATGAATTGTCCTGCTACTAACATCGCCTTCTCTTTCAACCCTTCTTTTCCCATACAAACAGATTTCTCCATCCAAAACCCTAGCAGCCACATCCAGCATTCCAAGGGTTGA 1284 0.4486 MDGLSWDASSQLVANIPILWSTQPQDLEGDHYQSFMPHPSSSVLNQTCYPYPSSEKVRDMVESSTTCEITSMMPNTNLPQRIAAMPVKSGAAGASWEEALTSQSCPSLSVNTNQTSNYEADFNMAHQQQHLISGKATCSLESLDCLLSANNNSNTDTSVEDDGISMMILSDCRNLWNFSYGSAVSSGESESDMRYPVNELDETVSRSFSDQYLSQGRVVDSEVICTKTSSSCFSIGQNSSSATEGGFRLISETSPKSKKARCDHRHPRSSNINFQQPNSCVSASFEEPDPEAIAQMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLDTMNCPATNIAFSFNPSFPIQTDFSIQNPSSHIQHSKG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13915g00001 427 Pfam Helix-loop-helix DNA-binding domain 336 375 IPR011598 GO:0046983
Mupr13915g00001 427 Gene3D - 331 394 IPR036638 GO:0046983
Mupr13915g00001 427 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 151 424 IPR045843 GO:0003700|GO:0006355
Mupr13915g00001 427 SMART finulus 332 381 IPR011598 GO:0046983
Mupr13915g00001 427 Coils Coil 365 385 - -
Mupr13915g00001 427 MobiDBLite consensus disorder prediction 253 275 - -
Mupr13915g00001 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 391 IPR036638 GO:0046983
Mupr13915g00001 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Mupr13915g00001 427 FunFam BHLH transcription factor 329 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13915g00001 Mupr-Chr13915 5986 7269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13915g00001 110 418 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 49.263 2.14e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr13915g00001 HLH 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13915g00001 - - gmx:100793830 664.07