Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13913g00002 ATGAAGCCGCCGGCGCCGCAGCCTCAGGTTCAGGCGGAGGGTGCCTCCGGCGCTCCGAAACCCTGCGAAGTGAGAGAGGTTGCAGAGAAGAAGAGCATAAACCCGGAGCTGTGGCAAGCTTGTGCGGGGCCTCTGGTGAACCTTCCCCCTTCCGGCACACACGTCATCTACTTCCCTCAGGGACACAGCGAACAGGTTGCTGCATCTTTGAAGAAGGATGTGGACGCTCAAATTCCCAACTATCCCAATCTTCCCTCAAAGTTACTCTGTGTCCTTCACAATCTCACTTTGCATGTACTACCACACATCTCCCTTTCCTTTATCGAATACACCATTTTACCTTTCTCTCTTTTAATTTCTCCTTTCCTTGGCCAGGCTGATCCCGAAACCGATGAAGTATATGCTCAGATGACGCTTCAACCAGTTCCTTCTTTTGACAAGGACGCTCTATTGAGATCAGATCTTGCTCTCAAGTCCACCAAGCCTCAACCCGAGTTCTTCTGTAAACAGCTCACGGCCAGCGATACAAGTACTCACGGCGGTTTCTCTGTGCCTCGTCGTGCCGCTGATAAGATTTTCCCCACTCTCGACTATTCTATGCAACCTCCCGCTCAAGAACTCGTCGCCAGGGATTTGCACGATACTGTTTGGACATTCCGCCACATATACCGTGGACAACCAAAGCGTCACTTGCTTACCACTGGGTGGAGTCTGTTTGTCAGTGGAAAGCGGCTCTTTGCCGGAGACTCTGTTTTATTTATAAGAGATGAAAAGCAGCAGCTTCTTTTGGGTATCAGACGAGCCAACAGGCAACCCACCAATATTTCGTCATCGGTTTTATCAAGTGATAGTATGCACATTGGAATTCTTGCTGCAGCGGCTCATGCAGCTGCAAATAATAGTCCTTTCACCGTCTTTTATAATCCTAGGGCTAGTCCGTCGGAATTTGTTATTCCTCTAGCCAAGTACTACAAGGCAGTGTACAGCCATCAACCATCACTTGGCATGCGTTTCCGAATGATGTTCGAAACTGAAGACTCGGGAACAAGAAGGTATATGGGTACAATTACAGGTATCAGTGATCTGGATCCTGTGCGATGGAAAAACTCTCAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACCGCTGGAGAAAAGCGTAGCAGGGTATCAATCTGGGAAATTGAACCAGTGACTGCTCCATTTTTCATCTGTCCACCTCCATTCTTTAGATCCAAGAGGCCTAGACAACCTGGAATGCCTGATGATGAATTATCTGATTTTGATAACCTGTTCAAGCGGACAATGCCTTGGCCTGGTGATGATATGTGCATGAAGGAACCCCAAGGTCTCCCTGGCCTGAGCTTAGCTCAATGGATGAACATGCAGCAAAGTCCTGCACTGGCTAGCTCATTGCAACCAAATTATGTACCTTCCTTACCAGGATCTATTTTGCAAAATATTCCTGGAGCTGATATTTCACGTCAGCTGGGATTTTCTGCTCCACAAATTTCTCAGTCAAACAATGTAGCCTTCAATGCTCAGAGGCTGCTTCAGACTGCTCAACAACTGGATCACCTTCAGAAGCTACCATCTACTTCTAGCACATTGGGAACAGTCCTGCCGCTGCAGCAACAATTGGGTGATATCACTCAACAACCGAGGCAGAACTTGGTAAATCAAACTAATCCACAGGGTCAAGTTCAGGCCCAACCCTTGCATCCCCAGAACATTGTCCAAAACAACAATAATATTCTTCAACAGCAGCAACCGTCCATTCAAAACCATCAACTCCATAGAAGCCTCTCTCAGAACCCATCGCAGCAGCAGCAGCAGACAATTACAGGTCAGAATCAACAACAAAATTTGATCCAGCCTCCTATGCCTGATCATGTTCAACAATTACTGATGTCTGACAATCAGATTCAGTTGCAGTTGTTGCATAAGCTTCAACAACCAAAACAAACGCTATTGGCACAGCAAACTGCATTGCAGCAGCCTACTCAACTTACTCAAATCCAGGATCAGCAGAAACAGCTTTTAGATAAAACACATAACTTGTCTAGAGCACTAACACCTGGTCAAGTACTGGAAATTCCTCCTGTACTTCAGAATTCACTTCCTGAGGCTAATTCTATCTCAAATCAGATGATGAAGGCTAATTGCCAGAACAATATTCAATTTTCTCAGCAGCCGAAGCTTCAACAGCAGCAACCTGGCTTGCTTTCTGAAATGTCTGGCCACATGGCATTTCTCCCTACCCCTACAACCAACCAGCTTTCTGCTGCTGGCAGTAGTATACTGACTGGAGCAGCTGGTGCAGGGCAATCTGTAATTACTGATGATGTTCCATCTTGCTCCACCTCACCTTCTACAAATAACTGTGCCAATGCACTTCCACCATTGATAAATTCCCGATTCCAGAGAAGCACAATAGTAGGGGATGACATGGCCCAGTCTGCTGCCACAATCTTCACTTCAAGTGCCTTAGAAACAATGTCATCAAATGCAAACTTGTTGAAAGATTTGCAGCCTAAGTCTGAAGTTAAGCCTTCTCTGAATATTTCCAAAAATCAGAATCAAGGGCATTTTGGTCCTCAGACATACTTGAATGGTAGTGCTGCCCATACAGACTGTTTGGATACATCATCTTCTACAACATCAGTTTGCCTTTCTCAGAGTGACGCTCATATGCATCAGAATAACAACCCATTATCTTACAATCCACAGTCTATGTTGTTTAGAGACAATAGTCAAGATGGGGAAGTTCAGGCAGATGCTAGGAGCAATATTCCATATGCCAATAACATTGATAGCCAAATGGGAATGCCACTGAATCCAGATTCCTTTTTAACCAAAGGCACATTGGGGTTAGGGAAGGATTTGTGTAATAATTTCTCTTCAGAAGGCTTGCTTGGTAATTATGAAAATAACAGAGATGCTCAACAGGAACTTTCGTCTTCAATGGTTTCGCAGACATTTGGAGTCCCTGAGATGGCCTTCAATTCAATTGATTCCACTATAGATGATAGTAACTACTTGAATAGGGGTACCTGGGCTCCACCACCAGCACCGCCACCACCACCTCTGCCACCGGCACAGTTACAGCGGATGAGGACATATACCAAGGTATATAAACGTGGAGCTGTAGGAAGGTCCATAGACATAACTCGATATTCAGGTTATGAAGAGCTTAAACAGGATCTAGCCCGTAGGTTTGGCATAGAGGGACAGCTGGAGGATCAGCAAAGGATAGGTTGGAAACTTGTCTACGTAGATCATGAGAGTGATGTTCTACTAGTGGGAGATGACCCTTGGGAGGAGTTTGTGAACTGTGTGCGCTGTATTAAAATACTTTCTCCTCAAGAAGTGCAACAGATGAGCTTGGATGGAGATTTTGGCAATGGTGGCCTTCCAAATCAAGCCTGTAGCAGCTCTGACGGTGGGAATACTTAA 3459 0.4562 MKPPAPQPQVQAEGASGAPKPCEVREVAEKKSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLKKDVDAQIPNYPNLPSKLLCVLHNLTLHVLPHISLSFIEYTILPFSLLISPFLGQADPETDEVYAQMTLQPVPSFDKDALLRSDLALKSTKPQPEFFCKQLTASDTSTHGGFSVPRRAADKIFPTLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMPDDELSDFDNLFKRTMPWPGDDMCMKEPQGLPGLSLAQWMNMQQSPALASSLQPNYVPSLPGSILQNIPGADISRQLGFSAPQISQSNNVAFNAQRLLQTAQQLDHLQKLPSTSSTLGTVLPLQQQLGDITQQPRQNLVNQTNPQGQVQAQPLHPQNIVQNNNNILQQQQPSIQNHQLHRSLSQNPSQQQQQTITGQNQQQNLIQPPMPDHVQQLLMSDNQIQLQLLHKLQQPKQTLLAQQTALQQPTQLTQIQDQQKQLLDKTHNLSRALTPGQVLEIPPVLQNSLPEANSISNQMMKANCQNNIQFSQQPKLQQQQPGLLSEMSGHMAFLPTPTTNQLSAAGSSILTGAAGAGQSVITDDVPSCSTSPSTNNCANALPPLINSRFQRSTIVGDDMAQSAATIFTSSALETMSSNANLLKDLQPKSEVKPSLNISKNQNQGHFGPQTYLNGSAAHTDCLDTSSSTTSVCLSQSDAHMHQNNNPLSYNPQSMLFRDNSQDGEVQADARSNIPYANNIDSQMGMPLNPDSFLTKGTLGLGKDLCNNFSSEGLLGNYENNRDAQQELSSSMVSQTFGVPEMAFNSIDSTIDDSNYLNRGTWAPPPAPPPPPLPPAQLQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDQQRIGWKLVYVDHESDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPNQACSSSDGGNT 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13913g00002 1152 Gene3D - 165 268 IPR015300 -
Mupr13913g00002 1152 ProSiteProfiles B3 DNA-binding domain profile. 167 269 IPR003340 GO:0003677
Mupr13913g00002 1152 Pfam Auxin response factor 293 376 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr13913g00002 1152 MobiDBLite consensus disorder prediction 592 626 - -
Mupr13913g00002 1152 CDD B3_DNA 166 258 IPR003340 GO:0003677
Mupr13913g00002 1152 Pfam B3 DNA binding domain 167 268 IPR003340 GO:0003677
Mupr13913g00002 1152 FunFam Auxin response factor 165 269 - -
Mupr13913g00002 1152 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 1129 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr13913g00002 1152 FunFam Auxin response factor 331 402 - -
Mupr13913g00002 1152 Gene3D - 1035 1129 - -
Mupr13913g00002 1152 SUPERFAMILY CAD & PB1 domains 1053 1118 - -
Mupr13913g00002 1152 MobiDBLite consensus disorder prediction 1 23 - -
Mupr13913g00002 1152 SUPERFAMILY DNA-binding pseudobarrel domain 156 296 IPR015300 -
Mupr13913g00002 1152 ProSiteProfiles PB1 domain profile. 1040 1124 IPR000270 GO:0005515
Mupr13913g00002 1152 Gene3D - 331 402 - -
Mupr13913g00002 1152 SMART B3_2 167 269 IPR003340 GO:0003677
Mupr13913g00002 1152 FunFam Auxin response factor 1035 1129 - -
Mupr13913g00002 1152 Pfam AUX/IAA family 1039 1125 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13913g00002 Mupr-Chr13913 5384 11330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13913g00002 28 510 B3 DNA Binding Superfamily AT1G19220 68.930 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr13913g00002 B3 8.5e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13913g00002 - - ccaj:109803454 1891.32