Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13911g00001 ATGGACCCTACTTTGGAAAATTTTGAAGCTGCTTTCCCTTTATTAATTAAATTAGGCATCATGGGAACCCCACAATCCAACAACTTGCCACCAGGGTTTAGGTTCCACCCTACAGATGAAGAGCTCATTCTTCACTACCTAAGGAAGAAGGTGGCCTCTATTCCTTTGCCAGTTTCCATCATTGCTGAGGTTGATATCTACAAGTTTGATCCATGGGATCTACCAGCTAAGGCTGCGTTTGGGGAGAAAGAGTGGTACTTCTTCACTCCTAGAGACCGCAAGTACCCAAATGGAGCCAGGCCAAACAGGGCAGCTGCTTCA 321 0.4611 MDPTLENFEAAFPLLIKLGIMGTPQSNNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKFDPWDLPAKAAFGEKEWYFFTPRDRKYPNGARPNRAAAS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13911g00001 107 Gene3D NAC domain 38 107 IPR036093 GO:0003677|GO:0006355
Mupr13911g00001 107 PANTHER NAC TRANSCRIPTION FACTOR 56 29 106 - -
Mupr13911g00001 107 ProSiteProfiles NAC domain profile. 29 107 IPR003441 GO:0003677|GO:0006355
Mupr13911g00001 107 Pfam No apical meristem (NAM) protein 30 105 IPR003441 GO:0003677|GO:0006355
Mupr13911g00001 107 SUPERFAMILY NAC domain 25 105 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13911g00001 Mupr-Chr13911 3 875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13911g00001 27 107 NAC Transcription Factor Family AT3G04070 87.654 1.69e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr13911g00001 NAM 4.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13911g00001 - - gmx:100817074 183.341