Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13907g00003 ATGGCTGCTTGTGCTTTGTTCAGCGGTGGCGCTACCATTACCGAAGATGGAAATGCTAGTCCTTTGACTAGTGCCTCTAACTCGAGCAACATGAGCAACGAAGACCAACAACAACACAACCTACACATGCCACAGCCTCATTGTGAGAGAAAAATGGTGAGAAAAAGAATGGCTTCTGAGATGGATCAAGTTCATGTTCACGCCACTACGCCACACGCCAGTGATTATCCTAGGTTTCCTCGTCGAAGCACCGCCAACATGTCCTTAGAAAAAGGGTCCACCACCGCCACCACAACAACGTTAGCCGCAGGTACATGTAGCAATAGTAATAATAATAATAATAATAATAATAATAGCAATAATAATAATAGCTACCATTATAATAATAGTAACAATAGTAGTAACATTTCGTCAAGAGATAACGTTGGTATTCCAAATTACCCCACTGTGACGGTCACCACCAACTACTCCACTATGTTGCTACCTTCTTCCACCCCCATCAATTCCTCTGCCGTTGCTCCAAACTACACTCACCAACACCATTTCCAAGAAAGCCAAATCCAGGACCAGCAAAACCCTTTACCTGCAGTCTGTGGTTTCTCAGGGTTACCACTTTTTCCATCTCAAAGAAACCGAGACAACAACAACAACAACATAAGAAACAGTGGTAATATTGTTGACGTGGTGGCTTCTTCTTCTTCTTCTCCTTCCATGGAAGACAGCTCCGCCACGAGTGGTTGGATCGATGGCATATTGAAGGATCTCATTCACAGTTCCAACAGCGTTTCAATTCCTCAACTTATCAACAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTGGCTATTGTTCTCGAATACAGGTTGCGCCTTCTTCTCACTGACTCCACTCCACAAAACAAAAGAAGCACCACAGAAGGGTTACCTCTTCCTCAACACGTGTCCTCAAAGCTCATGAACAACATTGTGCCTAATATTCACTTCACAGACACTTCAGGTGCTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCAACCTCAAATCACTCACCATCATGATAACAATAACAACACAAACAATAACCCTTCAGTTTCTTTGGTTACTTTACCTTCACCGGCACCAACACCACCTCAAGAGAAGCAGCAGGCTCAGGAGGAAGATCTAGCGGCAAGCACAAGTGCTGAGGTGGCACTGACACGAAAGAAGAAAGAGGAGTTACGCGAACAAAAGAAGAAGGACGAGGAGGGTTTGCATCTTTTAACTTTGCTGCTCCAGTGTGCAGAAGCTGTTTCAGCTGAGAATCTAGAAGACGCCAACAAGATGCTGCTAGAGATTTCTCAACTCTCAACACCCTTTGGCACTTCAGCACAGCGCGTAGCAGCTTATTTCTCAGAAGCCATATCAGCGAGGTTGGTGAGTTCGTGTTTAGGGATATACGCCACTTTGCCACACACTCATCAGAGCCACAAGGTGGCATCGGCTTTTCAAGTCTTCAACGGTATAAGCCCTTTTGTGAAGTTTTCACACTTCACAGCAAACCAAGCTATTCAAGAAGCTTTTGAAAGGGAAGAGAGGGTGCACATCATAGATCTGGACATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTTCACATTCTGGCCTCGAGACCTGGTGGTGCCCCTTATGTGAGGATCACGGGGCTTGGTACCTCCATGGAAGCACTTGAAGCCACGGGTAAGCGTTTGTCTGACTTTGCAAACAAACTTGGCATTCCCTTTGAGTTCTTCCCTGTGGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTAGTAAAACCGAAGCTGTTGCTGTTCACTGGCTGCAACATTCCCTCTATGATGTCACTGGCTCAGACACCAACACTTTATGGCTTCTGCAGAGGCTGGCACCTAAAGTGGTGACTGTGGTAGAACAAGACCTTGGAAACACTGGTTCGTTCTTGGGGAGGTTTGTGGAAGCCATACATTACTACTCAGCATTATTTGACTCTCTTGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAGCTATTGTCTAGGGAGATTCGCAATGTACTAGCTGTTGGGGGGCCATCAAGGACTGGGGAACCAAAGTTTCACAACTGGAGAGAAAAGCTTCAGCAGTGTGGGTTTAGAGGTATATCTCTAGCTGGTAATGCTGCTGCTCAAGCTAGTATACTCCTTAATATGTTCCCATCTGAGGGCTATACCTTGGTGGAGGATAATGGCATCCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTTTCATAGTACCACTGCCATTACCCATCACAACAACTAG 2388 0.4619 MAACALFSGGATITEDGNASPLTSASNSSNMSNEDQQQHNLHMPQPHCERKMVRKRMASEMDQVHVHATTPHASDYPRFPRRSTANMSLEKGSTTATTTTLAAGTCSNSNNNNNNNNNSNNNNSYHYNNSNNSSNISSRDNVGIPNYPTVTVTTNYSTMLLPSSTPINSSAVAPNYTHQHHFQESQIQDQQNPLPAVCGFSGLPLFPSQRNRDNNNNNIRNSGNIVDVVASSSSSPSMEDSSATSGWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAIVLEYRLRLLLTDSTPQNKRSTTEGLPLPQHVSSKLMNNIVPNIHFTDTSGAAVVVNQHMLSNWGVPQPQITHHHDNNNNTNNNPSVSLVTLPSPAPTPPQEKQQAQEEDLAASTSAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGAPYVRITGLGTSMEALEATGKRLSDFANKLGIPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLGNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAAAQASILLNMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHSTTAITHHNN 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 349 374 - -
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 349 417 - -
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 13 43 - -
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 102 141 - -
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 403 417 - -
Mupr13907g00003 795 Coils Coil 395 415 - -
Mupr13907g00003 795 Pfam GRAS domain family 426 781 IPR005202 -
Mupr13907g00003 795 ProSiteProfiles GRAS family profile. 416 781 IPR005202 -
Mupr13907g00003 795 MobiDBLite consensus disorder prediction 10 45 - -
Mupr13907g00003 795 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 380 776 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13907g00003 Mupr-Chr13907 22804 25701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13907g00003 187 782 GRAS Transcription Factor Family AT3G54220 65.785 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr13907g00003 GRAS 1.7e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13907g00003 - - gmx:100806779 1217.6