Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13904g00001 ATGTTGCAAGAAGCAAGACCAAATAGAAAAGGAGGCCTTCGCGATGAAGAAAGCTTCTGGCGCATTGCCACCAGGAAACAAACTCCGCCACGGTGCAGGAAGAGGAAATCACGCAAGAGACGCAGTGGTGGAAGTGATTCTGTGGAAGACACTCTTGAAAAGTGGAAGGAGTATAACAGGCAGCAACAACTTGGCATTAGAGCAAATGGGATGGAAGTGATTCACAAAGCTCCTGCAAAAGGCTCAAGAAAAGGGTGCATGAGAGGTAAAGGAGGGCCTCAGAACTCTGATTACAAGTTCAGAGGTGTGAGGCAGAGGATTTGGGGTAAATGGGTTGCTGAGATTCGCGAACCTATCAATAGCAAGCTTGTGGGTGAGAAACCAAATAGGCTTTGGCTTGGTACTTTCTCCACTGCACTTGAAGCTGCTCTTGCTTACGATGAGGCAGCTAAGGCCATGTATGGCCCTTGTGCTCGTTTGAATTTCCCTGAGTCATCTATGGAGCCATTAGACTCTAATGGATCATTGTTGTCGTTGTCATCGTCGACGTTCAGTGGATGTAATAAGAAATCACCAAGTGCTTCTCCAGACACCTTGAATGGTGGTGATGTTGCACAAGCTGAGGAATTGGAGGGGAACCTTCATCGGTCTCATGAAGAGAAACCAAGGTTTTCTAAGGTTGGTGTCTTTGAGGAAACAGAAGAGAAACCGGTTTTTTGTTGTATGGCTGATGACTCAATAGAGGAGTTGAAAGATATGACAATTGGCTTTGAAGAATGTAAGGCTAAAGCTCTTAAGAATGTTAAGTCTGAAGCAGCTGGAGAAAGTGAAGGAGTTGAGAGAGAATTAGAGGAGGTTGTGAAAATATCTGGCATAAGTGAAGAGAGTAATCACTTGCAGATGAATACAAGGGGTAACTATTGTAGCTCTTCTGATGCTACTGAACATGAGATTCTGGTAAAGAGTGAAGAAACAAGAGGAGAATCAGTTGAAGCTTTGAAATCTACTGAGTTAAGCTGCAGCAACCATTGCCTTGGATATATGCATAATATGTTGCCAGATAGCAATTCAAGACCAAATTATGAGCAATTTAATAACACACAAACTGAGGCTTCTATTGCAAAGAAACATACTGAGGAAGTAATTTCTGAAATCCTGGGACTATGTCACAGCAAGTGCTTGCAGATTAGTCATTCTCAGTTACCAAATGAGCAATATAGAAGTGAACACTTTGATGAGATGAAAACTAAGCTTAAGGGTTTGGAGTGCAAGCCGAGAGCAAATTCTATTAATTACAAGAATCAGGCACCCATAGTTGGGGATTCCAATCACCCTTCTATGCAGGGAATTCATCTGTTTGGAGGTGGCACTGTTGGACCTATTGAAAGTATGTCCCAAGTTGAGGCTTTGAACAACATCAATGCAAACAGAAATTCACTACCTTCTGGCCATAGTAGGAAGTTGAGTGATCTTCCTCAACATTTACACAAAATTGGTGGTTACTTTCCTGAGCATTGGAATAGTATGCAGTTTGCAGACTTGGAAGTGGGTTATGATTATAGTTTCTTACGTCCTGATTATGATTTTGGCTTAGTGGAAGAGCAGAAGTTACTTGATATATGCTTTCCTCATGTAGGATCTTAG 1644 0.4221 MLQEARPNRKGGLRDEESFWRIATRKQTPPRCRKRKSRKRRSGGSDSVEDTLEKWKEYNRQQQLGIRANGMEVIHKAPAKGSRKGCMRGKGGPQNSDYKFRGVRQRIWGKWVAEIREPINSKLVGEKPNRLWLGTFSTALEAALAYDEAAKAMYGPCARLNFPESSMEPLDSNGSLLSLSSSTFSGCNKKSPSASPDTLNGGDVAQAEELEGNLHRSHEEKPRFSKVGVFEETEEKPVFCCMADDSIEELKDMTIGFEECKAKALKNVKSEAAGESEGVERELEEVVKISGISEESNHLQMNTRGNYCSSSDATEHEILVKSEETRGESVEALKSTELSCSNHCLGYMHNMLPDSNSRPNYEQFNNTQTEASIAKKHTEEVISEILGLCHSKCLQISHSQLPNEQYRSEHFDEMKTKLKGLECKPRANSINYKNQAPIVGDSNHPSMQGIHLFGGGTVGPIESMSQVEALNNINANRNSLPSGHSRKLSDLPQHLHKIGGYFPEHWNSMQFADLEVGYDYSFLRPDYDFGLVEEQKLLDICFPHVGS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13904g00001 547 SUPERFAMILY DNA-binding domain 99 164 IPR016177 GO:0003677
Mupr13904g00001 547 MobiDBLite consensus disorder prediction 1 52 - -
Mupr13904g00001 547 MobiDBLite consensus disorder prediction 27 41 - -
Mupr13904g00001 547 FunFam Ethylene-responsive transcription factor 2 99 164 - -
Mupr13904g00001 547 CDD AP2 99 165 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 ProSiteProfiles AP2/ERF domain profile. 99 163 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 MobiDBLite consensus disorder prediction 8 22 - -
Mupr13904g00001 547 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 Gene3D AP2/ERF domain 98 165 IPR036955 GO:0003700|GO:0006355
Mupr13904g00001 547 Pfam AP2 domain 99 155 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 SMART rav1_2 99 169 IPR001471 GO:0003700|GO:0006355
Mupr13904g00001 547 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 35 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13904g00001 Mupr-Chr13904 4063 6302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13904g00001 38 186 AP2-EREBP Transcription Factor Family AT2G40340 53.642 5.44e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr13904g00001 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13904g00001 - - gmx:100500303 767.303