Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13885g00002 ATGTCTCGTATAGTGACAGGAATTGATGAATCCACGATTAGCAAACAAGAGCCGGCAAATGATATGGGAAGCAAAGGTGGGTTTTTCCGTTATGCAGATGGCGTTGACAAATTGCTATTACTTTTTGGGACTTTGGGTTGCATTGGAGGTGGCCTACAAACCCCTATCACAATGCTTGTTCTTGGAAGTTTGATAGATGATTATGCTGGTGGATCTGAACATTCTGTGTCCAACCATATTATAGACAAGTACGCTCTAAGGCTGCTGTGTGTTGCAATTGGGGTTGCTTTATCCTCCTTTATAGAAGGGGTATGTTGGACAAGAACTGCAGAGAGACAAACTTCCCGCATGAGAACTGAATATCTCAAATCAGTCCTAAGGCAAGAAGTTGGTTTTTTCGACAAGCAAACTGACTCTTCCACAACTTTCCAAGTTATTGCCACCATAACTTCTGATGCTCAAACAATCCAAGATACAATGGCTGATAAGGTGCCCAATTGTGTGGTTCACCTCTCAGCATTTTTCTCTAGCTTTATAGTGGCACTCTTCCTTTCTTGGAGACTTGCAGTAGCTGCTTTTCCATTTTCAATCATGATGATCATGCCAGCAATCGTATTTGGGAAGGCCATGAAAGAGCTGGGAAATAAAATGAAGGATGCATACGGAGTTGCTGGTAGCATAGCTGAACAAGCAATCTCATCAATTCGCATTGTTTATTCATATGTAGGTGAGAAGCAAACACTAAAAGCCTTCAACTCAGGTCTTCAAAAAAGTATGGAGATTGGCATTAAACAAGGTCAAACCAAGGGAGTGATAATTGGTAGCATTGGGTTACTATATGCTACTTGGGCATTCCAATCTTGGGTTGGTAGTGTTCTGGTCAGGACCAAAGGAGAAAATGGTGGCCATGTGTTTTGTGCTGAAATATGCATCATTTGGGGAGGACTGTCACTGATGAGTGCACTCCCAAATCTTGGTTTCATATTAGAGGCAACAACAGCTACAACCCGAATTTTTGAGATGATTGATCGAGTGCCAACAATAAATTCTTATAAAGAAAAAGGAAAGGTCTTAACACATGCGAGAGGAGAGATCACGTTTAAAGAGGTTGAGTTTAGTTACCCATCAAGGCCAGATGCACTGATTCTCCAAGGACTCAATCTGAAAGTGCAGGCGGGTAAAACACTAGGCCTAGTTGGAGGGAGTGGTTCTGGCAAATCTACTATAATCTCTTTGCTTGAAAGATTTTATGATCCTGTATATGGTGAGGTATTGCTTGATGGATATGATATAGAGACACTCCACGTTAAGTGGTTAAGGTCCCAGATGGGACTGGTCAATCAGGAGCCAATTCTCTTTGCAACATCCATAAGGGAAAACATTCTATTTGGCAAGGAAGGAGCTTCAATGGAAGCTGTTATAAGTGCAGCGAAGGCAGCAAATGCACATGATTTCATTGTTAAACTTCCTAATGGATATGAAACTCATGTAGGACAATTTGGAGCTCAGTTGTCTGGAGGGCAAAAGCAAAGGATTGCCATTGCAAGGGCTTTAATACGAGAACCTAAAATCCTACTACTTGATGAAGCCACAAGTGCTTTGGATTCACAGTCCGAAAGACTAGTGCAAGATGCCCTTGATAAGGCTTCTAGAGGCAGGACAACAATCATCATAGCGCATCGCCTATCCACAATTCGTAAGGCTGATTCAATAGTAGTTCTTCAATCAGGAAGAGTGGTTGAATGTGGTTCCCATGATGAACTACTCCAACTGAACAATGGACAAGGAGGGACTTACAGCAAAATGCTACAACTGCAACAAGCAACAAGTCAAGACGAAAATGCATTACATCAAATAAACAAGAGCCCTTTAGCTATGGTAAATCTAACAAGTCCAAATTCAAGATGGCAAAATAGTCAAACTCACAATGAATTTAGCTCAACACAACCATTTAGCCCCATATATTCAATCAGTGTTGCAGGTTCCAGCTGTGATGACTATAGTAATGAAAACTGGGAGAAATCTTCACATGCAAGCTTCTCTCAATGGCGTTTACTAAGAATGAATGGCCCTGAGTGGAAACATGCTTTGCTTGGGTGTTTAGGGGCCATTGGCTCTGGAATATGTCAGCCAATTTACTCCTATTGCTTGGGAATAGTTGCATCTGTCTACTTTATAAAAGATGACTCTCTCATCAAATCAGAAATCAGGTTGTACTCGTCCATCTTCTGCTGCATAGCTGTTGTCAACTTCATTTCAGGCCTCCTTCAACATTACAATTTTACCATTATGGGAGAGCACTTGCTAAAAAGGGTGCGAGAAAATTTGCTAGAGAAGGTGCTGACCTTTGAGATGGGATGGTTTGATCAAGAGGAGAACAGCTGTGCAGCAATTTGTGCTTGTTTGGCAACTGAAGCCAACTTGGTTCGATCTCTTGTTGCAGAACGAATGTCATTGTTAGTTCAAGTTTCTGTCATGGCTATCTTGGCCTTTGTACTCAGTTTAATTGTTACATGGAGGGTGTCTATTGTCATGATAGCAATGCAGCCTTTGATCATTGCATGTTTTTACTCAAAAAACATTCTCATGAAAAGTATGGCAGGCAAAGCAAGAAGGGCTCAAAAAGAGGGTAGTCAATTAGCAATGGAAGCTACTAGCAACCACAGGACCATTGCTGCATTCTCATCTGAGAAAAGGATTTTGAATTTGTTCAGAACTGCTATGGAAGGCCCCAGGAAGGAAAGCATCAAGCAATCATGGATTTCAGGTTGCATATTGTCAGCCTCATATTTTGTAACAACAGCATCAATAACTTTGACTTTTTGGTATGGAGGCCGGTTATTGAATCAAGGGCTGGTGGAATCAAAACATCTTTTGCAAGTTTTCCTCATTTTGATGGGCACTGGTAGACAAATTGCTGAGACAGCGAGCACCACTTCTGACATAGCTAAAAGTGGAAGAGCCATTAGTTCAGTATTTGCAATACTGGATAGGAAAAGTCAGATTGAACCGGAAGATCCTAGACATAGAAAGTTCAAAAACACAATGAAAGGCCATATTAAACTGAGAGATGTCTTCTTTTCATACCCTGCAAGGCCAGATCAAATGATTCTCAAGGGCCTCAGTCTTGATATTGAAGCTGGCAAAACAGTTGCATTAGTAGGACAAAGTGGCTCGGGAAAATCCACCATCATTGGCTTAATTGAAAGATTTTATGACCCCATGAAGGGATCCATATCCATAGACAATTGTGACATAAGGGAATTTAACTTGAGAAGTTTGAGATCACATATTGCTTTGGTGAGTCAGGAGCCCACCCTCTTTGCAGGAACTATACGTGACAACATTGTGTATGGCAAAAAGGATGCATCAGAAGATGAAATAAGAAAGGCAGCACGTCTTTCAAATGCTCATGAGTTTATAAGTTCAATGAGAGATGGGTATGATACTTACTGTGGAGAAAGAGGAGTGCAGCTATCAGGAGGGCAGAAGCAAAGGATAGCAATTGCTCGAGCAGTGCTAAAGAACCCTTCAATCCTTCTGCTAGATGAGGCAACAAGTGCTCTAGACAGTGTGTCAGAGAATCTAGTGCAGGAGGCACTGGAGAAAATGATGGTTGGAAGAACCTGTGTAGTTATAGCTCATCGTTTGTCGACAATACAAAGTGTTGATTCCATTGCTGTGATTAAAAATGGGAAGGTGGTGGAACAAGGGTCGCACTCAGAGTTATTGAGCATAGGATCAAATGGGGTTTATTACTCCTTGACTAGGCTACAACATGACTATAGAGTTTAA 3795 0.414 MSRIVTGIDESTISKQEPANDMGSKGGFFRYADGVDKLLLLFGTLGCIGGGLQTPITMLVLGSLIDDYAGGSEHSVSNHIIDKYALRLLCVAIGVALSSFIEGVCWTRTAERQTSRMRTEYLKSVLRQEVGFFDKQTDSSTTFQVIATITSDAQTIQDTMADKVPNCVVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMIMPAIVFGKAMKELGNKMKDAYGVAGSIAEQAISSIRIVYSYVGEKQTLKAFNSGLQKSMEIGIKQGQTKGVIIGSIGLLYATWAFQSWVGSVLVRTKGENGGHVFCAEICIIWGGLSLMSALPNLGFILEATTATTRIFEMIDRVPTINSYKEKGKVLTHARGEITFKEVEFSYPSRPDALILQGLNLKVQAGKTLGLVGGSGSGKSTIISLLERFYDPVYGEVLLDGYDIETLHVKWLRSQMGLVNQEPILFATSIRENILFGKEGASMEAVISAAKAANAHDFIVKLPNGYETHVGQFGAQLSGGQKQRIAIARALIREPKILLLDEATSALDSQSERLVQDALDKASRGRTTIIIAHRLSTIRKADSIVVLQSGRVVECGSHDELLQLNNGQGGTYSKMLQLQQATSQDENALHQINKSPLAMVNLTSPNSRWQNSQTHNEFSSTQPFSPIYSISVAGSSCDDYSNENWEKSSHASFSQWRLLRMNGPEWKHALLGCLGAIGSGICQPIYSYCLGIVASVYFIKDDSLIKSEIRLYSSIFCCIAVVNFISGLLQHYNFTIMGEHLLKRVRENLLEKVLTFEMGWFDQEENSCAAICACLATEANLVRSLVAERMSLLVQVSVMAILAFVLSLIVTWRVSIVMIAMQPLIIACFYSKNILMKSMAGKARRAQKEGSQLAMEATSNHRTIAAFSSEKRILNLFRTAMEGPRKESIKQSWISGCILSASYFVTTASITLTFWYGGRLLNQGLVESKHLLQVFLILMGTGRQIAETASTTSDIAKSGRAISSVFAILDRKSQIEPEDPRHRKFKNTMKGHIKLRDVFFSYPARPDQMILKGLSLDIEAGKTVALVGQSGSGKSTIIGLIERFYDPMKGSISIDNCDIREFNLRSLRSHIALVSQEPTLFAGTIRDNIVYGKKDASEDEIRKAARLSNAHEFISSMRDGYDTYCGERGVQLSGGQKQRIAIARAVLKNPSILLLDEATSALDSVSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDSIAVIKNGKVVEQGSHSELLSIGSNGVYYSLTRLQHDYRV 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13885g00002 1264 FunFam ABC transporter B family member 4 1010 1263 - -
Mupr13885g00002 1264 Pfam ABC transporter 383 532 IPR003439 GO:0005524
Mupr13885g00002 1264 Pfam ABC transporter 1038 1187 IPR003439 GO:0005524
Mupr13885g00002 1264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 365 601 IPR003439 GO:0005524
Mupr13885g00002 1264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1020 1256 IPR003439 GO:0005524
Mupr13885g00002 1264 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 338 - -
Mupr13885g00002 1264 Gene3D - 1006 1263 IPR027417 -
Mupr13885g00002 1264 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 305 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13885g00002 1264 Pfam ABC transporter transmembrane region 41 297 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13885g00002 1264 Pfam ABC transporter transmembrane region 698 964 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13885g00002 1264 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 697 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13885g00002 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1012 1259 IPR027417 -
Mupr13885g00002 1264 FunFam ABC transporter B family member 4 355 614 - -
Mupr13885g00002 1264 CDD ABC_MTABC3_MDL1_MDL2 1020 1259 - -
Mupr13885g00002 1264 SUPERFAMILY ABC transporter transmembrane region 28 346 IPR036640 GO:0005524|GO:0016020
Mupr13885g00002 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 606 IPR027417 -
Mupr13885g00002 1264 CDD ABC_6TM_Pgp_ABCB1_D2_like 686 1002 - -
Mupr13885g00002 1264 Gene3D - 363 644 IPR027417 -
Mupr13885g00002 1264 ProSitePatterns ABC transporters family signature. 1159 1173 IPR017871 GO:0005524|GO:0016887
Mupr13885g00002 1264 ProSitePatterns ABC transporters family signature. 504 518 IPR017871 GO:0005524|GO:0016887
Mupr13885g00002 1264 Gene3D ABC transporter type 1, transmembrane domain 88 993 IPR036640 GO:0005524|GO:0016020
Mupr13885g00002 1264 SUPERFAMILY ABC transporter transmembrane region 684 1004 IPR036640 GO:0005524|GO:0016020
Mupr13885g00002 1264 CDD ABC_MTABC3_MDL1_MDL2 365 606 - -
Mupr13885g00002 1264 PANTHER ABC TRANSPORTER B FAMILY 15 751 IPR039421 -
Mupr13885g00002 1264 SMART AAA_5 392 578 IPR003593 GO:0016887
Mupr13885g00002 1264 SMART AAA_5 1047 1233 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13885g00002 Mupr-Chr13885 2077 8289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13885g00002 41 609 Calmodulin-binding Proteins AT2G36910 36.237 1.30e-103 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13885g00002 K05658 - gmx:100804664 2229.52