Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13883g00001 ATGAGGAGCAGTGTAGGAGATATTGTGCAGGTAGAAGGAGGGCACATTGTTAGGTCCACAGGTAAAAAAGATCGCCACAGCAAGGTTTACACTTCAAAAGGGCCACGCGATCGTAGGGTTAGACTCTCAGCACACACAGCCATTGAGTTCTATGATGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTTGACTGGCTCATCAAGAAGGCAAAGTCTTCCATTGACAAGCTTGCTGAGCTTCCTCCATGGCATCCAACTACTCATGAGGAAGAGCAGAATGATGCTGCAGATTCAACTGGAATCACAGCCATCACACAACAACAACAACAATCAGAGTCTTGTGGTTACAACTTTCAGCTACAAAGGCAATTTGGGGCCTTCATTTCACCCCAT 402 0.4652 MRSSVGDIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPTTHEEEQNDAADSTGITAITQQQQQSESCGYNFQLQRQFGAFISPH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13883g00001 134 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Mupr13883g00001 134 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 106 IPR005333 GO:0003700
Mupr13883g00001 134 Pfam TCP family transcription factor 20 112 IPR017887 -
Mupr13883g00001 134 MobiDBLite consensus disorder prediction 1 38 - -
Mupr13883g00001 134 MobiDBLite consensus disorder prediction 17 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13883g00001 Mupr-Chr13883 12 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13883g00001 5 88 TCP Transcription Factor Family AT3G15030 85.714 4.84e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr13883g00001 TCP 4.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13883g00001 - - vum:124834546 238.039