Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13882g00002 TATGCAAGCATTAATATACACACTGCACTCAGTACACTACACGCTGCACTCAGCAAAGTCTTCTCCTCTCGTGGAATTCAGCGTTATATTCAAACTTCCCCTCATACCCGCGCACCAACCCCGAGGCAGCATCCAAAAGAGAACCAACCAACTCAGAGGGCTGGACAAAAGGAGGGAGCGTCAAAGAAAGAGAGTGACACCAATAGAATAAACACTCTCAAAGATATGAAGCAGCAGCGCCAAGAGGAACAGCAGTGCAATGAAGAATCTAAGAAGAAGGAACGTCACATTGTGACTTGGACTCAAGAGGAGGATGATATACTTAGAGAGCAGATTGGTATTCATGGAACTGAAAATTGGGCAATTATTGCATCTAAGTTCAAGGACAAAAGCACAAGACAGTGCAGGAGAAGATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCAGCTGAAGAAGACAGGGTCTTATGTGAGGCTCAAAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACACTCTGCAGAAAGAGAGAAAAATATGCAGCTATAGCAAAAGAGAACAGCACCTCATACATCAATTCAAATAACAAGAGGATTATGTTCCAGCATTATAATAATTTGGATACAACATCAGAATCTGGAGTACCTAATAAGAAGATGAGGAGGGCCCATATCCCTGGTGATGCAGAAAAGATCAAATTTGGGGACCGATCTCATTTACGAAATGGAACTTCAATAAACCAGCAGCCAAGAGCACCATTTGCAGTATTAGCTCAAAACTCCCATAATGTAAACAACTTGCCAGACCAGCATCATGTTTGCAATCCCAAGTTTAACAGTTCCGTTCAAAATAACAAGATTCAAGGAACATTCCTCAAAAAGGGCGACCCGAAGATAACTGTATTGATGCAACAGGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAACCGAACCAAAGAATCAGATATCCCTGGACATAAGATTCCAGATTTACAGCTTGAAGATCTTAAAGATATGATCAAGGACTTGAAGAGCCGTAATGAAGAAGGCCAGGCTTGTTGGAGGCAAGTGGGATGTTACGAAAACTCTCCAGACAGTTCTGGATACAGTACAGGATCAACTCTCCTGTGTCAGTCAGCTGGTGATCATTTGGAGCACTCATTGCATCAGGATGTTGGAACTGAAATGAAATCTGAACAAATTCGAGATGAAAAAGGAGAAGATAGAGATGATGAGAAAGGGGTTCATTCTACTGCAAATGTAGATCAAGATACATTACCATATTGTGAGGAACAGATAAACAATGATGGGATTGTTTCTACCTCATCAAGATTGGAGTTCAGCTCCCCTCTTCAAGTAACCCCCCTGTTCAGATCCTTGGCAGCAGGAATTCCCAGCCCACAATTTTCAGAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAATGGAATCTCCATCCATCAACCCAAGTGCCAACTCATCACAACCGCCACCCTGCAAAAGAGCCCTACTACCT 1641 0.4205 YASINIHTALSTLHAALSKVFSSRGIQRYIQTSPHTRAPTPRQHPKENQPTQRAGQKEGASKKESDTNRINTLKDMKQQRQEEQQCNEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKSTRQCRRRWYTYLNSDFKKGGWSAEEDRVLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCRKREKYAAIAKENSTSYINSNNKRIMFQHYNNLDTTSESGVPNKKMRRAHIPGDAEKIKFGDRSHLRNGTSINQQPRAPFAVLAQNSHNVNNLPDQHHVCNPKFNSSVQNNKIQGTFLKKGDPKITVLMQQAELLSSLALKVDAENMDQSLENAWKVLQEFLNRTKESDIPGHKIPDLQLEDLKDMIKDLKSRNEEGQACWRQVGCYENSPDSSGYSTGSTLLCQSAGDHLEHSLHQDVGTEMKSEQIRDEKGEDRDDEKGVHSTANVDQDTLPYCEEQINNDGIVSTSSRLEFSSPLQVTPLFRSLAAGIPSPQFSESERNFLRKTLGMESPSINPSANSSQPPPCKRALLP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13882g00002 547 CDD SANT 99 143 IPR001005 -
Mupr13882g00002 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 143 IPR017930 -
Mupr13882g00002 547 FunFam Transcription factor MYB124 92 148 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 522 547 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 32 70 - -
Mupr13882g00002 547 Gene3D - 87 148 - -
Mupr13882g00002 547 SMART sant 148 196 IPR001005 -
Mupr13882g00002 547 SMART sant 96 145 IPR001005 -
Mupr13882g00002 547 Coils Coil 73 96 - -
Mupr13882g00002 547 SUPERFAMILY Homeodomain-like 96 190 IPR009057 -
Mupr13882g00002 547 CDD SANT 152 193 IPR001005 -
Mupr13882g00002 547 Coils Coil 374 394 - -
Mupr13882g00002 547 PANTHER MYB PROTEIN-RELATED 99 236 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 523 539 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 431 459 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 431 463 - -
Mupr13882g00002 547 MobiDBLite consensus disorder prediction 32 56 - -
Mupr13882g00002 547 ProSiteProfiles Myb-like domain profile. 100 143 IPR001005 -
Mupr13882g00002 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 198 IPR017930 -
Mupr13882g00002 547 ProSiteProfiles Myb-like domain profile. 144 194 IPR001005 -
Mupr13882g00002 547 Pfam Myb-like DNA-binding domain 100 158 - -
Mupr13882g00002 547 Gene3D - 151 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13882g00002 Mupr-Chr13882 9923 15634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13882g00002 88 396 MYB Transcription Factor Family AT2G02820 61.022 1.18e-132 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr13882g00002 Myb_DNA-bind_6 9.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13882g00002 K09422 - gmx:100807667 712.99