Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13877g00001 ATGGCTGGGGATATCAAGGAGGGGAGGGCTTTGGCAAAAGGGTATTCTGTTATTTTACTGCTATTATTGACTTTACTTGTTTGTAGCACTGAGGGGTTGAACACTGAGGGGCAAATCCTGCTGGAGCTTAAGGATGGACTTGATGACAAATCTAATGTTTTGGAAAATTGGAGTTCTGCTGATGAAACCCCATGTGGATGGATAGGTGTGAATTGCACTCATGATAATAATAATACTAACAATTCTGTGGTTGTGTCTCTTAATTTGGGTTCAATGAATCTTTTTGGGACTCTGAATGTTGCTAGTATTGGGGGTCTGACTCATCTAACTTATCTCAATCTTTCTTTCAATGAGCTGACTGGAAATATCCCCAAGGAGATTGGTGAGTGCTTGAATTTGGAATTTCTTTATTTGAACAACAATCATTTTGAGGGATCAATTCCTGCTGAATTGGGAAAGCTGTCTGTTCTGAGAGTCTTGAATATTTGCAACAACAACCTCTCTGGTGTGCTTCCAGGTGAGTTAGGAAACTTGTCTTCACTGGTTGAGTTAGTGGCTTTTAGCAACTTTCTTGTTGGACCAATTCCTAATTCCATTGGAAATCTTAAGAACCTTGTAAATTTCAGAGCCGGGGCGAATAACATTACCGGCAAGTTGCCGAAGGAAATTGGTGGATGTAAGAGCTTAATGCGTCTTGGTCTTGCTCAAAATCAGATAGGAGGGGAGCTACCGAGCGAGATTGGGATGCTTAACAGCTTGAAAGAATTGATTTTATGGGGAAACCAGTTGTCAGGACCTATTCCTAAAGAGATTGGGAATTGTACCAGTCTTGAGAACATTGCTTTGTATGGGAATAATCTCATTGGACATATACCTAAGGAAATTGGGAACCTCAGATCATTGAGGTGGCTGTATGCTTATAGAAACAAGTTGAATGGAACCATTCCAAGGGAAATTGGAAATCTTTCTTTATGTTTACACATTGATTTCTCAGAGAACTCTTTAACAGGTGATATTCCTTCAGAGTTTGGCAAAATAAGTGGTTTAAGTTTGCTGTTTCTCTTTGAGAACCATCTAACTGGTTCTATACCAAATGAGTTTAGTAGCTTGAAGAACCTCACAAAGCTGGACCTGTCAATAAATGAACTTTCAGGTCCAATTCCATTTGGCTTCCAATATTTGACTAAAATGTATCAGCTGCAACTCTTTGACAACTCCCTAGATGGTATTATTCCTCAGGGACTTGGACTTCATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAACTTGACAGGAACAATACCTCCTCATCTATGCCGAAATTCTGGCTTGATGTTGGTGAATCTTGCAGCTAATCATCACCTCTATGGAAATATACCAACAGGGATACTAAACTGTAAATCATTGGCACAGTTGTTGTTATTTGGAAACAGGCTTACTGGAAGCTTTCCTTCAGAATTGTGTAAGCTGGAGAACATAACTGCCATTGATTTGAATGAGAACATGTTCAGTGGTCCACTCCCTGCTGAAATTGGTAGCTGCAACAAGTTGCAAAGGCTTCATATTGCAAACAATTACTTCACACTGGAGTTGCCTAAGGAAATAGGAAACCTCTCCCAATTGGTGACCTTCAATGTTTCATCAAATCTTTTCACTGGAAGAATCCCTCCAGAAATCTTTTGGTGTCAAAGGCTACAGCGGCTTGACCTCAGCCAGAACAACTTCTCTGGTTCCTTGCCAGATGAGCTTGGAACACTCCAGCACTTGGAGATTCTCAAGCTCTCAAACAATAACCTGTCTGGTCAAATTCCTGCAGCATTAGGCAATCTCTCTCACTTGAACTGGTTGTTGATGGATGACAATTACTTTTTCGGTGAAATACCTCCTCAATTGGGTTCTCTTTCAAGTTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCTGGAACAATACCGGTTCAGCTTGGCAACCTCAACATGCTTGAATATCTCTTTCTCAATAACAACCACTTGGAAGGTGAAATTCCAAGCACATTTGAAGATCTTTCAAGCTTGTTGGGCTGCAATTTCTCATACAACAACCTCTCTGGACCTATTCCTCCCACTAAAATTTTCCAAAGTATGGCTGTAAGCAGCTTCATTGGTGGCAACCAAGGCCTCTGCGGTGCACCTCTCGGTGACTGCGACACCAATCCAGCTTCTCCTCAAGGGAAAGGTTTTGATTCTCCCCGTGCCAAAATAGTCATGATCATTGCAGCTTCTGTTGGAGGTGTTTCACTCATTTTCATTTTGGTTATTTTGTATTTCATGAGACGTCCAAGGGAGTCTATTGATTCCTTTGGAGGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTCACAATTCAAGATCTTGTTGAAGCTACAAAAAGGTTTCATGACAGCTATGTCATTGGTAAGGGAGCATGTGGAACCGTTTATAAGGCAGTGATGAAGTCTGGTAAGACCATTGCTGTTAAGAAGTTAGCATCTAACAGGGAAGGGAACAACATTGATAATAGTTTCAGGGCTGAAATATCCACTCTAGGAAGGATAAGGCATCGGAATATAGTGAAACTGTATGGCTTTTGCTATCACCAAGGTTCCAATCTTCTGCTCTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGATCTGCAAGTAACTTGGAGTGGCCAACAAGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTAGCCTACTTGCATCATGACTGCAAACAGAAGATTATTCACCGTGATATAAAATCTAACAACATTCTGCTAGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCACAGTCTAAATCTATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACAATGAAGGTGACAGAAAAGTGTGACATTTATAGCTATGGTGTTGTGCTCTTGGAACTGATAACTGGAAGAACTCCAGTTCAGCCACTAGAGCAAGGAGGTGATCTTGTGACATGGGTAAGAAACCATATCCGGGATCACAACAACACATTGACAGCAGAGATACTGGACAGTCGTGTAGATCTGGAAGATCAAACCACTGTGAATCACATGCTCACTGTTCTAAAGCTTGCTATACTGTGCACAAGAGTGTCTCCTACCAAGAGGCCATCAATGAGGGATGTTGTGTCAATGCTCATCGAGTCCAATGAGCGCGAAGGAAACTTGACACTCACTCAAACATACCATGATTTTCCTTCCAAAGATGGCATTTGGGAATCATCATTGAATGTGTATCATGGAGACCGGATGGTTCAACCGTAA 3387 0.4139 MAGDIKEGRALAKGYSVILLLLLTLLVCSTEGLNTEGQILLELKDGLDDKSNVLENWSSADETPCGWIGVNCTHDNNNTNNSVVVSLNLGSMNLFGTLNVASIGGLTHLTYLNLSFNELTGNIPKEIGECLNLEFLYLNNNHFEGSIPAELGKLSVLRVLNICNNNLSGVLPGELGNLSSLVELVAFSNFLVGPIPNSIGNLKNLVNFRAGANNITGKLPKEIGGCKSLMRLGLAQNQIGGELPSEIGMLNSLKELILWGNQLSGPIPKEIGNCTSLENIALYGNNLIGHIPKEIGNLRSLRWLYAYRNKLNGTIPREIGNLSLCLHIDFSENSLTGDIPSEFGKISGLSLLFLFENHLTGSIPNEFSSLKNLTKLDLSINELSGPIPFGFQYLTKMYQLQLFDNSLDGIIPQGLGLHSPLWVVDFSDNNLTGTIPPHLCRNSGLMLVNLAANHHLYGNIPTGILNCKSLAQLLLFGNRLTGSFPSELCKLENITAIDLNENMFSGPLPAEIGSCNKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFWCQRLQRLDLSQNNFSGSLPDELGTLQHLEILKLSNNNLSGQIPAALGNLSHLNWLLMDDNYFFGEIPPQLGSLSSLQIAMDLSYNNLSGTIPVQLGNLNMLEYLFLNNNHLEGEIPSTFEDLSSLLGCNFSYNNLSGPIPPTKIFQSMAVSSFIGGNQGLCGAPLGDCDTNPASPQGKGFDSPRAKIVMIIAASVGGVSLIFILVILYFMRRPRESIDSFGGTEPPSPDSDIYFPPKEGFTIQDLVEATKRFHDSYVIGKGACGTVYKAVMKSGKTIAVKKLASNREGNNIDNSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASNLEWPTRFMIALGAAEGLAYLHHDCKQKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELITGRTPVQPLEQGGDLVTWVRNHIRDHNNTLTAEILDSRVDLEDQTTVNHMLTVLKLAILCTRVSPTKRPSMRDVVSMLIESNEREGNLTLTQTYHDFPSKDGIWESSLNVYHGDRMVQP 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13877g00001 1128 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 290 394 - -
Mupr13877g00001 1128 Pfam Protein kinase domain 815 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13877g00001 1128 Pfam Leucine rich repeat 565 623 IPR001611 GO:0005515
Mupr13877g00001 1128 SUPERFAMILY L domain-like 53 408 - -
Mupr13877g00001 1128 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Mupr13877g00001 1128 ProSiteProfiles Protein kinase domain profile. 814 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13877g00001 1128 SMART serkin_6 814 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13877g00001 1128 Gene3D Transferase(Phosphotransferase) domain 1 892 1105 - -
Mupr13877g00001 1128 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 418 734 - -
Mupr13877g00001 1128 SUPERFAMILY Protein kinase-like (PK-like) 791 1087 IPR011009 -
Mupr13877g00001 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Mupr13877g00001 1128 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 892 1104 - -
Mupr13877g00001 1128 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 32 195 - -
Mupr13877g00001 1128 SMART LRR_typ_2 154 177 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 587 611 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 250 274 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 298 322 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 370 393 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 106 130 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 660 683 IPR003591 -
Mupr13877g00001 1128 SMART LRR_typ_2 539 563 IPR003591 -
Mupr13877g00001 1128 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 785 891 - -
Mupr13877g00001 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 548 1088 - -
Mupr13877g00001 1128 Gene3D Ribonuclease Inhibitor 191 290 IPR032675 -
Mupr13877g00001 1128 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 196 289 - -
Mupr13877g00001 1128 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mupr13877g00001 1128 Gene3D Ribonuclease Inhibitor 291 417 IPR032675 -
Mupr13877g00001 1128 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Mupr13877g00001 1128 Gene3D Phosphorylase Kinase; domain 1 790 891 - -
Mupr13877g00001 1128 SUPERFAMILY L domain-like 466 729 - -
Mupr13877g00001 1128 Gene3D Ribonuclease Inhibitor 418 734 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13877g00001 Mupr-Chr13877 8875 13891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13877g00001 33 1089 Receptor kinase-like Gene Family AT4G26540 38.791 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr13877g00001 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13877g00001 - - gmx:100807838 1936.77