LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr13863g00002	ATGGGCTTTTGGGATAGTAATAGGAAGAGAAGCCCAATGAAAACAGAAGCAGATGTCGAGGTGGATGTTGCGGCAGGACAGCCGAAGAAGAGAACTTTCAAAAAGTTCAGCTTCAGGGGCGTGGATCTGGACGCGCTTCTCGACATGTCCACCGATGAGCTCGTGAAGATGTTTAGTGCACGCGCTCGTAGAAGGTTCCAGAGAGGCCTCACCAGAAAGCCCATGGCCTTGATTAAGAAGCTCCGCAAAGCGAAAAGGGAAGCACCAGCAGGTGAGAAGCCAGAACCAGTCCGCACCCACCTTCGGAACATGATTATTGTTCCTGAGATGATTGGAAGCATAATTGGTGTGTACAATGGGAAGACCTTCAACCAGGTCGAAATCAAACCCGAGATGATTGGACATTATCTCGCTGAGTTTTCAATTTCGTATAAACCAGTTAAGCATGGTAGACCTGGTATTGGTGCAACTCACTCCTCCAGGTTCATTCCTCTTAAGTGA	501	0.483	MGFWDSNRKRSPMKTEADVEVDVAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK	166

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr13863g00002	166	PANTHER	RIBOSOMAL PROTEIN S19P FAMILY MEMBER	24	166	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	NCBIfam	30S ribosomal protein S19	33	166	IPR005713	GO:0003735\|GO:0006412\|GO:0015935
	Mupr13863g00002	166	Pfam	Ribosomal protein S19	64	149	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	SUPERFAMILY	Ribosomal protein S19	69	150	IPR023575	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	ProSitePatterns	Ribosomal protein S19 signature.	119	143	IPR020934	GO:0003723
	Mupr13863g00002	166	PRINTS	Ribosomal protein S19 family signature	99	118	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	PRINTS	Ribosomal protein S19 family signature	119	131	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	PRINTS	Ribosomal protein S19 family signature	131	146	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	PIRSF	RPS19p_RPS19a_RPS15e_RPS19o	23	166	IPR002222	GO:0003735\|GO:0005840\|GO:0006412
	Mupr13863g00002	166	FunFam	40S ribosomal protein S15	23	166	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr13863g00002	Mupr-Chr13863	2892	3893	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr13863g00002	17	166	Cytoplasmic Ribosomal Protein Gene Family	AT5G09500	88.667	5.56e-93	265

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr13863g00002	K02958		-	gmx:100801408	292.352

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