Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13845g00002 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAACAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTGCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCGGTGAAGGCTTCTGGGGCGTACAAGAGCTGCAGGCCTTGTTCAGGATCTTCCAATGGTGGCAGGAATAAGAAGTATGCAGAGTCGGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAATGGAAGGTGGTAGGGTGAAAGGGCTTTCAAGTGGGGAGGGAACACCAGCATCAGTGAGTGGACGTACCGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAGCGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTATACAATGTTCAAAGGTTCAATCAGCAAGCAGTGCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGCCCTGTCACTCCTCCACTCAGCAAAGAGCGGCCACCCCGTCATTTTCACCACCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCAATCTCACCCTTGCTATGAAACAAGCGGTCTGGCATCAACACCTAATCTTTCCAACATTGGTGCACCAAAGACAGAAAGATCATCCATTGATGGTTCTGTAAGGACCAGTTCATCTGGAGAGGGAGATCACTCCGGCGAGTTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAAGATGAACCAGGAGTATACATCACTATCAGAGCATTGCCTGGTGGAACCAGAGAACTCAGGCGGGTCCGGTTCAGTCGAGAAAAGTTTGGAGAAATGCATGCCAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTACAACTGCTTCAGCAGGCTAACACAGTACAACTTGAAAGCTTTACAACAATGTTGTGCATTCTAGATCCAGTTACCTTCTTTCCGGTGGATAATTTGCATACTGAAATTTATTAA 1221 0.4799 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGGRNKKYAESDMGSDSARFNWAYRRTGSSNSTPRMWGKEMEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERPPRHFHHPMGMGYSSSDSLDHHQMQSHPCYETSGLASTPNLSNIGAPKTERSSIDGSVRTSSSGEGDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYLQLLQQANTVQLESFTTMLCILDPVTFFPVDNLHTEIY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13845g00002 406 MobiDBLite consensus disorder prediction 91 123 - -
Mupr13845g00002 406 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Mupr13845g00002 406 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Mupr13845g00002 406 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Mupr13845g00002 406 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Mupr13845g00002 406 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
Mupr13845g00002 406 MobiDBLite consensus disorder prediction 200 308 - -
Mupr13845g00002 406 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Mupr13845g00002 406 MobiDBLite consensus disorder prediction 248 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13845g00002 Mupr-Chr13845 18495 22707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13845g00002 1 369 Major Intrinsic Protein MIP AT1G31880 48.438 1.89e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13845g00002 - - gmx:100805480 726.472