Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13835g00005 ATGTCTACCCCTGATTCTCCAGTCGACCCCGATATCGACTCCGATCCATCTCTTGAAGAAGAAGAAGAAGAAGTCGAAGAAGAAATAGAGGAGGAGGAAGTGGAAGAGGAAGAAGTAGAAGAGGAAGAGGAAGAGGTCGAGGAAGAAGTAGAAGAGGAGGAAGACGAGGAAGAAGTAGAAGAGGAAGAGGAAGAGGAAGAAGTGGAAGAAGAGGTTGAGGAAGAAGAAGAAGAGGAAGAGGAGGAGGAAGATGGAGAACAAGAAGTAGAGGAAATGGAGGAAGAAGAAGGAGAAGAAGAAGACGAAGAGGAAGAGGAGGAAGAGGAAGAAGAAGAAGATCAACAACCACAAAAAGAAAACCAACAACAGCAAGTAGGAGAAGCAGTGGAGGAGAAGAAGGAAGAGCAACAACCACAAGAAGCAGCAATGGAGGAGAAGGAGGACAAAACGGCGGTGCCTGGTTCTTCACCCGATGCCGATAATCAAGAACATAGAAAAGAATGGAGGGTGGGTGTTACCAGAAATACTGCCGAAGGTGGTGGCTGTTGGTCTCTGTGGATTGTCACCATAGAGAGCGGTGTGTGGGTAGGCCACAACAGTGACAAAATCGCTGGAAACTGGCTGGAAAAGAGATGGGTCTTCATAAACAGGTGGGAATCATCGAGAACAGAGTCTGGATGCTGGAAAAGAGCTACATGGCAGTGTGTAAAGGCGAGCGGTGCCGGAAACTGGTGGAGGGATGCGAACAAGGGCTCTGTGGGGGAGGCTACGGCTTGCGTGACTTGCACTAACAAACATAAGGGGAACCGAAAACAATTGCAAACTGCCGTGATAGCAGCTATGAATCACGCCGCTCCTCCTGCTACAGCCAGGCACTACGACTCACTTCCAGGGAGCAGGACCAAAACACGTTGCAATGTTGTCATAGCCTCAGGCATTTGGTGTTGTGACAGGGCCCAAATTGGTGATTCAAGCCAACATATGGAGTCTAAAGGGCAAGAGAAAAACTTGGGGCCAGTTTCTTCTGTGGCTGAAAACCCTGAGGTAATGCCACCATCTAGTATGCATTGCATGGGAGAGAATGATGCCATGCTCAAAAAGTCTGTTTCATGTCAGACACTAACATTGAAAAAGGAAGAGGTTCACCTGAAATATGAAATTTCAAGTCATCCAAAATCAAGAGAAAATCTGACTTCTGTTGAAGATTGCAGAAGTCAAGGATTAGATGTTGATGTTGAAAATGCTGGATCCCTTCTACAGAAGGAAACATTTGGAGGATACAGTGAGCCAGGTTGCAATAGCAATGCTAATTTATGTGGTGATAATGATCTTGATCCTAGGGCCAGGGTCACCAAGTCATCTAGTGATACTGGACAAGATATGGATATTGGCCTCCTACCGAGAGATTGCCTTGTTGAGGATGCTAATGGTGGTCAGAATTCTAGGAACAAAACCATGCAGTCAGAGATGGAGTCTAGGGATGATGTGAAACAAGTGACATTAAGGACTAGAAGTCTGTCTCCCAGTGCTGAGATTAAAGACAGAAACAAACGCCCCAGAATTGTATGTGATTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCTTGTAGCTTTCTTCATATAAAAGATACTGTGGACTACACTGACCAGGAAGCTGAAGCAGACTTAGTTACTGCACATCAGAAGAGAGAATTGAAAGTGGAAGAAGGTGTTAGGGAAAATGTTGAGAGATCAAGGATGAATGAGCAAGAAGCAAGCCCTAGTTGGCATCCATCTCAAGAAAAACAGAAGTTTCCGATGAGGGATAACTTGTTTCCAGAGAATAGATTTGCATTTAATGCATCAAACAATTATTTCAGCCCAAATCTTTCTCTGAATTCAACCCGTGCAGATGGAGTGGCTACTCTTCGGAACCAACATATGTACAGAGGATATACTTCTACAGTTTTGAGCCATTCACCAAATTCAAGCCTGGTTACTCAATTTCCAGCTACAAGCATGTCACTCTCCCACCGGATTCCAGCCCAATCAGGACGTTCATTGCCTTTTAGTTCATCTTTGGGGGCAAGTAATGTGGATTCTCAAAAGCTTTTGCACACTGACAAAGAATATGCCACCTCTAAGTCCACTTTCTCTGGTTCAGGGCGAGAAGATTTGGCTCTAGTTAGTTCATCTAGGATTCCATCATATCCTACTGGATATAAATCAAAACTCCGTTCTTATAATTGGGAACCTTCTGTGCCCTTTCGACCATCCTTTTTCATTACTTCTATGAATGTATCATCTCCTGGAGATCTTTATGACCCTCTTCGTGATAGCATTGAGATACCTAATTTAGGAGATGGGTCTTTGAAGGCTTACCTTTTAATTCATGGATCAAATGTACAGGCTTCATCACAGGTTCAGACATACGATGATTCTGCTGTAGTTGGGAAACACCTGTCCAATCTTAATGATGAGAAAAGTTCTGTGTCTTCTCACAATAAATTTTGTGAAAATGAGCCAAACAAAAGTAGTGTTCCTCATGAAAAAGATGGTCTTGCACCTGAAACAGAGATAACATCAGGAACTTATGTAAACTATCAAAATGGTAAAATGGGCATGGGACAACATACCTTTGGTGTTGCAGATAGTACAAAAAGAGAGAGAAATTTGACTGAGCACGATGCTAGACATCATGGTGAAGGATCGGGGCACAAAAAGAAGAGAGTAGATAGGGATAAGAAAAGTCATGAAATGGATGTTGACTTTCTGACGGATGGTAGCATGCAGAAGGAATCAAAGGCATTAAAATTTTTTCGTGCAGCTCTTGTTGAACATGTAAAAGAGTTGTTAAAAGCAGCTTGGCAAGAGGGTCGTCTCAGCAAGGATGCACATAATATGATAGTAAAAAAATCAGTTGACAAGGTTGTTAGCACCTTAGAGCCCCATCAGATTTCGACCATAGATACTGCTAAGCAATATGTTTCTTCAAGTCGGGTAAAAATAGCAAAGCTTGTCAATTGCTTTAAATCCCGGATAACGGCATGTATCAGCCGCTGTAAATTTCTTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTGAACTTCATTGA 3102 0.4336 MSTPDSPVDPDIDSDPSLEEEEEEVEEEIEEEEVEEEEVEEEEEEVEEEVEEEEDEEEVEEEEEEEEVEEEVEEEEEEEEEEEDGEQEVEEMEEEEGEEEDEEEEEEEEEEEDQQPQKENQQQQVGEAVEEKKEEQQPQEAAMEEKEDKTAVPGSSPDADNQEHRKEWRVGVTRNTAEGGGCWSLWIVTIESGVWVGHNSDKIAGNWLEKRWVFINRWESSRTESGCWKRATWQCVKASGAGNWWRDANKGSVGEATACVTCTNKHKGNRKQLQTAVIAAMNHAAPPATARHYDSLPGSRTKTRCNVVIASGIWCCDRAQIGDSSQHMESKGQEKNLGPVSSVAENPEVMPPSSMHCMGENDAMLKKSVSCQTLTLKKEEVHLKYEISSHPKSRENLTSVEDCRSQGLDVDVENAGSLLQKETFGGYSEPGCNSNANLCGDNDLDPRARVTKSSSDTGQDMDIGLLPRDCLVEDANGGQNSRNKTMQSEMESRDDVKQVTLRTRSLSPSAEIKDRNKRPRIVCDFFAKGWCIRGSSCSFLHIKDTVDYTDQEAEADLVTAHQKRELKVEEGVRENVERSRMNEQEASPSWHPSQEKQKFPMRDNLFPENRFAFNASNNYFSPNLSLNSTRADGVATLRNQHMYRGYTSTVLSHSPNSSLVTQFPATSMSLSHRIPAQSGRSLPFSSSLGASNVDSQKLLHTDKEYATSKSTFSGSGREDLALVSSSRIPSYPTGYKSKLRSYNWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNLGDGSLKAYLLIHGSNVQASSQVQTYDDSAVVGKHLSNLNDEKSSVSSHNKFCENEPNKSSVPHEKDGLAPETEITSGTYVNYQNGKMGMGQHTFGVADSTKRERNLTEHDARHHGEGSGHKKKRVDRDKKSHEMDVDFLTDGSMQKESKALKFFRAALVEHVKELLKAAWQEGRLSKDAHNMIVKKSVDKVVSTLEPHQISTIDTAKQYVSSSRVKIAKLVNCFKSRITACISRCKFLPPPPPPPPPPPLELH 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13835g00005 1033 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 35 1001 - -
Mupr13835g00005 1033 SMART c3hfinal6 518 543 IPR000571 GO:0046872
Mupr13835g00005 1033 Coils Coil 15 115 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 880 895 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 819 849 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 1 167 - -
Mupr13835g00005 1033 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 522 541 IPR000571 GO:0046872
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 819 836 - -
Mupr13835g00005 1033 SUPERFAMILY CCCH zinc finger 517 541 IPR036855 GO:0046872
Mupr13835g00005 1033 ProSiteProfiles Zinc finger C3H1-type profile. 517 544 IPR000571 GO:0046872
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 880 911 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 475 500 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 572 597 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 12 115 - -
Mupr13835g00005 1033 MobiDBLite consensus disorder prediction 125 167 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr13835g00005 zf-CCCH 9.1e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13835g00005 - - gmx:100819734 1132.86