Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13827g00001 ATGCCGGAGCTTCGTAGCGGAGTGCGACGTGGCCGTGGCCGTGGCCGAGGCCAGAAGGGTCCGGAACCGGCAAAGAAGAACGTGAAGGCTCCTGCGGCGCCGGCGGCCAGGGGGAGACCGAGGACTCGATTGGCGGCGAAGAAATTGGAGCGCGAGGAGCCGCTGATCCCGATACCGGAGCCGTTGATCCCAATACCGGAGCCGCGGAAGGAAGAGAAGAAGAAAGAAGGTGCGGGCGTGATGGGTGATGAAAGTGGTGGGGTAAGTGCTAACAAGGGCGAGGATGATACCACCACTCCACCTTTTCCAGACAAGGTTCAAGTAGGAGGGTCACCTATGTACAAGGTAGAGAGGAAACTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGTCGCCGTGAGCGTGCAACAGGTGCTGGTGCCATGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAGGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTTATGGACATACTTGGTCCAAGTTTGTGGGATCTCTGGAATTCCTCAAGCCAGACGATGTCAGCTGAAATGGTCTCATGTATAGCGGTTGAGTCCTTATCAATACTTGAGAAGATGCACTCAAAAGGTTATGTACATGGAGATGTAAAACCAGAGAATTTTTTACTTGGTCAGCCAGCTACAGCGCTAGAGAAGAAACTGTTTCTTGTTGACCTTGGATTAGCAACAAAATGGAGAGACACCTCCAGTGGACTGCATGTTGAATATGATCAACGTCCAGATATGTTTAGAGGGACTGTTCGATATGCTAGTGTTCATGCTCATTTGGGGAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTCATCTTCCTTCATAAGGGTCGATTACCATGGCAAGGTTATCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAGATTCTGTGCTGCATGTGCCCTCCTCCTTTTAAGCAATTTCTTGAGAGTGTAGTGAATATGAAATTTGATGAAGAACCTAATTATTCCAAGCTAATATCTTTGTTTGACGGTGCAATTGGACCGAATCCAGCATTGCGGCCAATTAGTACTGAAGGTGCCCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATAATGATGAAGATGATTCACAGCCAAAAAAGAAGGTTCGTTTAGGGGTTCCTGCTACACAATGGATTTCAATTTACAATGCAAGACTACCAATGAAACAAAGGTATCATTACAATGTGTCTGATGCAAGATTAGAACAGCATGTTGAGAGAGGGATTGCAGATGGCCTTCTTATTAGTTGTGTGTCTTCTTGTTGCAATCTATGGGCACTTATTATGGATGCTGGAACTGGTTTTACTGGTCAAGAATGGATCATGGAGCAGTGGGATAAAAACTATTACATTACTTCTATTGCAGGGACCAATAATGGCAGCTCTCTTGTGGTGATGTCAAAAGGCACGCAGTATACTCAACAATCCTACAAAGTAAGCGAATCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTCACCTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGCAATGCTGGATTCAGTAAACAGGTGGTCGAACTTGATTTTCTCTATCCAAGTGAGGGCATCCATAAACGTTGGGATAAAGGTTATAGGATTACCGCAACTGCAGCTACATTGGATCAATCTGCTCTTATATTAAGTATTCCGAGGCGCAGGCCCAGTGATGAAACTCAGGAAACTCTTCGTACATCTCAATTTCCCAGTACGCATGTTAAGACTCAATTAATTATCTACGGTATTTAA 1869 0.4569 MPELRSGVRRGRGRGRGQKGPEPAKKNVKAPAAPAARGRPRTRLAAKKLEREEPLIPIPEPLIPIPEPRKEEKKKEGAGVMGDESGGVSANKGEDDTTTPPFPDKVQVGGSPMYKVERKLGKGGFGQVFVGRRERATGAGAMEVALKFEHRNSKGCNYGPPYEWQVMDILGPSLWDLWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATALEKKLFLVDLGLATKWRDTSSGLHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPEILCCMCPPPFKQFLESVVNMKFDEEPNYSKLISLFDGAIGPNPALRPISTEGAQKVGQKRGRLNNDEDDSQPKKKVRLGVPATQWISIYNARLPMKQRYHYNVSDARLEQHVERGIADGLLISCVSSCCNLWALIMDAGTGFTGQEWIMEQWDKNYYITSIAGTNNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSKQVVELDFLYPSEGIHKRWDKGYRITATAATLDQSALILSIPRRRPSDETQETLRTSQFPSTHVKTQLIIYGI 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13827g00001 622 ProSiteProfiles Protein kinase domain profile. 114 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13827g00001 622 ProSitePatterns Protein kinases ATP-binding region signature. 120 147 IPR017441 GO:0005524
Mupr13827g00001 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mupr13827g00001 622 SMART serkin_6 114 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13827g00001 622 MobiDBLite consensus disorder prediction 369 397 - -
Mupr13827g00001 622 MobiDBLite consensus disorder prediction 1 23 - -
Mupr13827g00001 622 CDD STKc_CK1 113 358 - -
Mupr13827g00001 622 MobiDBLite consensus disorder prediction 383 397 - -
Mupr13827g00001 622 Gene3D Transferase(Phosphotransferase) domain 1 89 401 - -
Mupr13827g00001 622 MobiDBLite consensus disorder prediction 65 80 - -
Mupr13827g00001 622 Pfam Protein kinase domain 173 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13827g00001 622 PANTHER CASEIN KINASE-RELATED 108 598 - -
Mupr13827g00001 622 MobiDBLite consensus disorder prediction 1 109 - -
Mupr13827g00001 622 SUPERFAMILY Protein kinase-like (PK-like) 114 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13827g00001 Mupr-Chr13827 1243 7277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13827g00001 201 358 MAP Kinase Kinase Kinase AT5G50180 25.625 1.02e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mupr13827g00001 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13827g00001 - - gmx:100807373 1048.11