Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13814g00001 ATGGCCTCTTCTAGCTACTCGAATTCTCCATGTGCAGCCTGTAAGTTTCTGAGAAGGAAGTGCATGCCAGATTGCATTTTCGCCCCATATTTCCCTCCAGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATATTTGGTGCAAGCAACGTGAGCAAACTTCTGAACGAGGTGCAGCCCTATCAGAGAGAGGATGCTGTGAACTCTTTGGCCTATGAAGCTGAAGCACGGATCAAAGATCCAGTGTATGGTTGTGTTGGGGCCATCTCAGTGCTCCAAAGACAAGTCCTTAGGCTCCAAAAGGAACTTGATGCCACAAACGCTGATTTGATCCGCTCTAGTTGTAATGAAACTACTCATCAAGGTAGAGGGAGAAGGATCAGTGATGGTGCTTCCTCACTTAGTCACTCTAATGGTTTTTATAATCCTTCTACTAATTGGAAACAGTGA 450 0.4511 MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPYQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVLRLQKELDATNADLIRSSCNETTHQGRGRRISDGASSLSHSNGFYNPSTNWKQ 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13814g00001 149 Coils Coil 89 109 - -
Mupr13814g00001 149 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mupr13814g00001 149 MobiDBLite consensus disorder prediction 116 149 - -
Mupr13814g00001 149 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 121 - -
Mupr13814g00001 149 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13814g00001 Mupr-Chr13814 1689 2138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13814g00001 4 126 AS2 family AT3G27650 79.365 3.43e-70 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr13814g00001 LOB 2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13814g00001 - - gmx:100788656 258.07