Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13810g00003 ATGGAAGGTCGCCGGAGGGTAACGCTATATGAACAAATGTCAGCTTCGGAGAGCAACCGCGCCCGAGAGCTAGCCGGCTTGACCCTTGACGATGTGTTAGCCAACCAGAAGAGACCTGGCTCGGCACCGCCGCTCACATTCAAAAACCGAACCCTTCTTGACATCATCAAAGAAGACGAGACCAACAAGAAGGACCGAAGGTCTTGGAAGGCCTTCAAGGACAAGCTTCGGCTCAAGCGGGCTGGGTCTGCTTGGACATCGTCGATTCATATTCCGACTTCGGATGTCCCTATCCCTAACCCAAACAGCCGAAGCTTTACCCAGCTTGGTCGCCGCAACTCGACCCGACTGGCTATAACTCATCCCGACTCGGACATTTCGGATCAGTACATGACTCACCAGGTGGAGGACCTCGACCCAACCGCCGCTGACGACGATGCCGACGCCGACGAATCCGATTCTCCGGTCGCCTCTCCGGCCACCGCGCCGGCCTCCTCGGCGCCTAGCCTCCATCAGTTCAGTCGCCGGGGCTCCACCCGCTTCACCGGCGATGTCTGCGACAACACCGCCGGCACCCTACGGCCGCAGCTGTCGTGGCGGAACTCGACGAGCACGATGTCGTCGGAACCGTACAAGCGGGGGCGCGTGGTGACGTTCCGCGACAGCTTTGACGACGACGAGCCCGAAGAGGACGAGAAGCAGGACGGGGCGAGGAGGATGTCGGCGAGGGAGGCGGTGGCGGCGCAGGAGGCGGCGGAAGCGGCGGCGGCGGGGGAGAAGGAAGAAGATGAGGATGAGGGGGGGCAGGCGCCGGCGATGATGTCACTGATGGATTTGTTAGAGGAGACTGACAGGGAGATGGGGCTGGAAGGGGGGAAGTATATATTGAGTGATGAGGAGTGTGATGAGGATGATGAAGCTGGGGAAGAGGATGGAGAAGGTGCTATGGAACACACTTGCTGTGTGTGCATGGTCAGGCATAAGGCTGCTGCTTTTATACCCTGTGGACACACTTTCTGCAGGCTCTGTTCCAGGGAGCTTATGGTTAGTAGGGGGAATTGCCCACTCTGCAACAATTTCATTTTGGAGGTTCTTGACATTTTCTGA 1107 0.5863 MEGRRRVTLYEQMSASESNRARELAGLTLDDVLANQKRPGSAPPLTFKNRTLLDIIKEDETNKKDRRSWKAFKDKLRLKRAGSAWTSSIHIPTSDVPIPNPNSRSFTQLGRRNSTRLAITHPDSDISDQYMTHQVEDLDPTAADDDADADESDSPVASPATAPASSAPSLHQFSRRGSTRFTGDVCDNTAGTLRPQLSWRNSTSTMSSEPYKRGRVVTFRDSFDDDEPEEDEKQDGARRMSAREAVAAQEAAEAAAAGEKEEDEDEGGQAPAMMSLMDLLEETDREMGLEGGKYILSDEECDEDDEAGEEDGEGAMEHTCCVCMVRHKAAAFIPCGHTFCRLCSRELMVSRGNCPLCNNFILEVLDIF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13810g00003 368 CDD RING-HC 319 357 - -
Mupr13810g00003 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 296 368 IPR013083 -
Mupr13810g00003 368 SMART ring_2 320 357 IPR001841 -
Mupr13810g00003 368 MobiDBLite consensus disorder prediction 158 211 - -
Mupr13810g00003 368 Pfam Zinc finger, C3HC4 type (RING finger) 317 362 - -
Mupr13810g00003 368 SUPERFAMILY RING/U-box 319 364 - -
Mupr13810g00003 368 MobiDBLite consensus disorder prediction 89 113 - -
Mupr13810g00003 368 MobiDBLite consensus disorder prediction 140 269 - -
Mupr13810g00003 368 PANTHER OS01G0917900 PROTEIN 21 368 - -
Mupr13810g00003 368 ProSiteProfiles Zinc finger RING-type profile. 320 358 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13810g00003 Mupr-Chr13810 20996 23433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13810g00003 13 368 C3H Transcription Factor Family AT3G07120 34.115 2.97e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13810g00003 - - gmx:100795449 439.884