Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13797g00001 ATGGCGATGAAGCGTTTGGTCAGAGTGAAGAGGGACGCGGTTAGACCATGCATGACTTGCCCGCTTTGCCACAACTTCCTCAAAGAGGCTACTACTATTTCTCTATGCCTTCATACGAAGTGCATTTATGATAAAATTACAGATGAAGAATTGGAAAATTGTCCAGTATGCAACGTTGATTTGGGCATTGTTCCTCTTGAGAAAATGAGGCCAGATAACAGTTTGCAAGATTTAAGGAACAAAATTTTCCCTTCCAATAAAAGAAAGGAGAAGGCACCAGTAACTGTCCCCTCAGTACTATTACCAGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAGTACTCCAAGGGTATCTACACAGTCAACCATGACAGGAAAAAGAACAAAACCTGCAAGAAAGGCTAGTGGGCAGGGCCCTAGTTTCTCCGTTGAAAAGCTTATTAAAAAAGAAGAGGAGCTACTGGAAGATCGCCAAGATAGTTCATGCTCACCTGACACTTCAAACAAATGTGCTAAGAATGCTGGACAGAGTTTGTCACCTTGTAAAAATAGCCAATCCATATGCAATAGAGGACCACAGAATGGAGCTGAACCACAGGAAGCAAAATGGGATCTTTGGAAAACTTTGAATTATTTAGCAGAGGCTGCAAGTAGGAGTAAGTCTAATATGCAAGCGTCTGATGCTAAACTAGAATCCATGAAAGTGACTGACAGTGGTACTAAAGTGCTGAAAGCCAAAATTAAAGAAAATAAGCGCAAGGCAAAAGTTGAAGATGAAAAGATTAGCACTGATAATGTCACTTCAGATACAGCAAAACCCATCAAATTGCGAAGAGTTCGCCCAAAAAAGGAACCTGTTTTTGGAGAATCTAGAATATCACCCCAGGCTGTTCTGGATGCTACTGGCAGTAATCTCTTATGGAATGATTCAATTTGGTTCTCCTTAGCAGCTTCTGAAAACCAGGAAGGAGATGCACCTTTACCCCAAATTCCTTCAAGTTATGTAAGAATAAAGGACGGAAGCATACCAGTCTTATTTATCCAAAAATTATTAACGAAGAAACTAGGCCTGAAAAGTGAGGATGAGGTTGAGATTAAATGCATGGGACATCCAGTGCTTCCTTCACTGCAGATACAAAATTTGGTTGAACTGTGGCTTGATGCATCTACAGGACACAGAATTCCAGCAACCATTGGATCCTCAGGGAAAGATTTTGTCATGATCCTAACCTATGGTCGGAAGGTCCTACAACCTTGA 1266 0.4107 MAMKRLVRVKRDAVRPCMTCPLCHNFLKEATTISLCLHTKCIYDKITDEELENCPVCNVDLGIVPLEKMRPDNSLQDLRNKIFPSNKRKEKAPVTVPSVLLPARRKERSLSSLVVSTPRVSTQSTMTGKRTKPARKASGQGPSFSVEKLIKKEEELLEDRQDSSCSPDTSNKCAKNAGQSLSPCKNSQSICNRGPQNGAEPQEAKWDLWKTLNYLAEAASRSKSNMQASDAKLESMKVTDSGTKVLKAKIKENKRKAKVEDEKISTDNVTSDTAKPIKLRRVRPKKEPVFGESRISPQAVLDATGSNLLWNDSIWFSLAASENQEGDAPLPQIPSSYVRIKDGSIPVLFIQKLLTKKLGLKSEDEVEIKCMGHPVLPSLQIQNLVELWLDASTGHRIPATIGSSGKDFVMILTYGRKVLQP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13797g00001 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 98 IPR013083 -
Mupr13797g00001 421 SUPERFAMILY RING/U-box 14 83 - -
Mupr13797g00001 421 MobiDBLite consensus disorder prediction 110 131 - -
Mupr13797g00001 421 MobiDBLite consensus disorder prediction 163 183 - -
Mupr13797g00001 421 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 417 IPR044807 GO:0004842
Mupr13797g00001 421 MobiDBLite consensus disorder prediction 157 183 - -
Mupr13797g00001 421 MobiDBLite consensus disorder prediction 110 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13797g00001 Mupr-Chr13797 1285 6231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13797g00001 1 341 C3H Transcription Factor Family AT2G30580 48.266 7.46e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13797g00001 K16277 - gmx:100778462 711.449