Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13794g00001 ATGGCCATTGAAACAAACCTCACAGAAAACTATGCCCCGCAGCCAATGCATTTGCAAGAGAACTACTTGAAACCCAGCATGGAAGATCAGCTTCCTTTTGGAACTCCTTCCTCGCAGGGTTTCTTGCAAGATTTTCATCATATTGATCATCAGTTTCATGTGAATGGATCCTCATCGTCCAATCCCATTTTCGGGGTACAAACTCCAAGTTTTGATCCCTTTGATCATAATGTAACGTGTGAGTCTGTACCTCCTGATTTTCAAGTTTATGAGTGCAAGCCTTTTGCTGAGAGTAATGCTAGTGGACATGCACATGCTCATCTTATTGACAATTTCCAATACGTAGGTTATAGTTTGAACCTCCCTCGGACGAATCAACTTGATATGATGGTTGCAAACCAAAGTTATCTTTCCTTCAATGCTCTAGAAACCAAGCCTTCGAATTTTGTTGTACCAGATGAAGTCTCGTGCATATCTCCACCAAATTATTATAAGAGAGTTGGCTTGAATAAAAGCATCATGAGGGAATCTCCAAGCACTAGGAGAACATTCAAAGCTCGCAAGAAGTCAAACATAGTGAAGGGACAATGGACAGCAGATGAAGACAGATTGTTGATTCAACTGGTCGAACAATATGGAGTGAGGAAGTGGTCCCATATAGCTCAGGCGTTGCCTGGAAGAATAGGGAAACAATGCAGGGAGCGATGGCATAACCATTTAAAGCCAGATATTAAGAAGGACATATGGGCTGAAGAAGAGGATAAGATACTGATCCAAGCTCATGCAGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAGATTGCCTGGAAGGACTGAGAACTCAATAAAAAACCATTGGAACGCAACAAAGAGAAGGCAATATTCCAAAAGAAAGTGTCGCTCAAAATACCCTAGAGGCTCTCTTCTTCAGGAATATATCAAGAGCCTGAACTTAGACCAAAATCCACCAATAGACTATCGAAAAAAATCTGCTAAAAATGCTAATAATGCCAAAACAAACAACAATGGCAAAGCATCAGCTCAGCCACAGAGTGCAGATCAATTTTGTCCAAATGGCCACTTGGTGCCAAAGTATGATTTTAACGAGGTCCCAGATTTTTGTTTAGATGAAAATTTGTTTGAAGAGGGATGTAGCATTGATTCTCTGCTAGATGACATGCAAAGTGCTTCTACTATGGACGAGAAAGATCTTGATGGAAAAATGCAATGTGCTCCTACTATGGAGGGAAAACAATCTCATCATGATGGCATCATGCAGTGTGTTCATGTTGTTAATGTTGATGAGCATCATGAGACTGAGATAATGGCACCCACAATGGGGATTGGAGTTAAGAAGGAGATGGATTTGGTGGAGATGATGTCACGCGTTAATGATGTCACACGTGTTGGTGTATAA 1419 0.4094 MAIETNLTENYAPQPMHLQENYLKPSMEDQLPFGTPSSQGFLQDFHHIDHQFHVNGSSSSNPIFGVQTPSFDPFDHNVTCESVPPDFQVYECKPFAESNASGHAHAHLIDNFQYVGYSLNLPRTNQLDMMVANQSYLSFNALETKPSNFVVPDEVSCISPPNYYKRVGLNKSIMRESPSTRRTFKARKKSNIVKGQWTADEDRLLIQLVEQYGVRKWSHIAQALPGRIGKQCRERWHNHLKPDIKKDIWAEEEDKILIQAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDQNPPIDYRKKSAKNANNAKTNNNGKASAQPQSADQFCPNGHLVPKYDFNEVPDFCLDENLFEEGCSIDSLLDDMQSASTMDEKDLDGKMQCAPTMEGKQSHHDGIMQCVHVVNVDEHHETEIMAPTMGIGVKKEMDLVEMMSRVNDVTRVGV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13794g00001 472 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Mupr13794g00001 472 PANTHER MYB PROTEIN-RELATED 174 346 - -
Mupr13794g00001 472 Gene3D - 248 308 - -
Mupr13794g00001 472 MobiDBLite consensus disorder prediction 334 352 - -
Mupr13794g00001 472 SMART sant 193 242 IPR001005 -
Mupr13794g00001 472 SMART sant 245 293 IPR001005 -
Mupr13794g00001 472 FunFam Transcriptional activator Myb isoform A 193 246 - -
Mupr13794g00001 472 SUPERFAMILY Homeodomain-like 191 287 IPR009057 -
Mupr13794g00001 472 Pfam Myb-like DNA-binding domain 194 240 IPR001005 -
Mupr13794g00001 472 Pfam Myb-like DNA-binding domain 249 288 IPR001005 -
Mupr13794g00001 472 CDD SANT 249 291 IPR001005 -
Mupr13794g00001 472 ProSiteProfiles Myb-like domain profile. 189 240 IPR001005 -
Mupr13794g00001 472 FunFam Transcription factor MYB119 247 311 - -
Mupr13794g00001 472 Gene3D - 193 246 - -
Mupr13794g00001 472 MobiDBLite consensus disorder prediction 321 352 - -
Mupr13794g00001 472 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 295 IPR017930 -
Mupr13794g00001 472 CDD SANT 197 240 IPR001005 -
Mupr13794g00001 472 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 244 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13794g00001 Mupr-Chr13794 6806 8816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13794g00001 62 394 MYB Transcription Factor Family AT4G18770 50.000 3.03e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr13794g00001 Myb_DNA-binding 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13794g00001 K09422 - gmx:100816653 809.29