Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13780g00001 ATGGACGAGGGCATGTCAGGCTTTTGCATTAGATCAGCGAGTGTCCGTGGTAAAAGTGGCAGCACTAGCACCACTGGCACAAAGTGTGGGCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTAACTGAACTATTCAGGTCAGGGCTCCGCACCCCAAGCACTGACCAGATTCAAAACATCTCCACTCAGCTAAGCTTTTATGGTAAGATTGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAGAAGCGCCGTAAGGTTTCCTTTGATGACAATATTGATGTCTTTCGTAGAGAAAACACTATCAATCCTTCTACACAAAGTCTTGCTGAGATGTATCAAGTTTCAGAGCCAGATAGGGTGATTGAGACTCTTCAACTCTTCCCCTTAAACTCCTTTGGTGAGTCTGAACCTCAGAAGCTGATGTTGCATGCAAATGAATGTAGGGATAATAGTACAATGTTTTCATACACAATGGGAGAACAAAGGGAACACCCACCATTAGACCTGAGCTTGAGCTTTCTCTAA 549 0.4408 MDEGMSGFCIRSASVRGKSGSTSTTGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQNISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDNIDVFRRENTINPSTQSLAEMYQVSEPDRVIETLQLFPLNSFGESEPQKLMLHANECRDNSTMFSYTMGEQREHPPLDLSLSFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13780g00001 182 SMART HOX_1 27 94 IPR001356 GO:0003677
Mupr13780g00001 182 Pfam Homeodomain 29 89 IPR001356 GO:0003677
Mupr13780g00001 182 CDD homeodomain 31 91 IPR001356 GO:0003677
Mupr13780g00001 182 FunFam WUSCHEL-related homeobox 11 28 96 - -
Mupr13780g00001 182 ProSiteProfiles 'Homeobox' domain profile. 25 90 IPR001356 GO:0003677
Mupr13780g00001 182 SUPERFAMILY Homeodomain-like 23 93 IPR009057 -
Mupr13780g00001 182 Gene3D - 28 96 - -
Mupr13780g00001 182 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 17 100 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13780g00001 Mupr-Chr13780 1623 2362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13780g00001 8 182 Wox Gene Family AT3G11260 54.787 3.05e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr13780g00001 Homeodomain 9.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13780g00001 - - pvu:PHAVU_008G226100g 296.589