Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13779g00001 ATGGCTCTTTCTATTCACAAGGACTCAGCCAACAACCAGATGGATTCAAGCAAGTATGTGAGGTACACACCCGAGCAGGTTGAGGCCTTGGAGAGGGTCTATGCCGAATGCCCAAAGCCAAGTTCTTTGAGGAGGCAGCAACTCATCAGAGAGTGCCCCATCCTTTCCAATATTGAACCAAAACAGATCAAAGTTTGGTTCCAAAATAGAAGATGTCGCGAGAAGCAGAGGAAGGAAGCTTCTCGACTGCAGACAGTGAACAGAAAGCTGACTGCAATGAACAAGCTGTTAATGGAAGAGAATGACCGTTTGCAGAAGCAGGTTTCTCATCTGGTTTATGAGAATGGATATATGAAGCAACAGATACAAACTGCCTCTGCTGGCACCACCACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGAATCAACAGCAAAACCCAACACCTCAGCATCCCAACAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGCGTGGCAGCACGAGCCTGCGGCCTTGTGAGCCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATCGGTCGTCGTGGTATCGTGACTGCCGATGCCTTGATGTGTTGAGTATAGTCCCCACAGGGAATGGGGGCACCATAGAGCTCATGTACATGCAGACATATGCGCCCACAACTTTGGCTGCGGCGCGGGACTTCTGGACACTAAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACTTCCTCAACTGGTGGCCCCACAGGCCCTCCTTCTACAACCTTCGTAAGAGCTGATATGCTTCCTAGTGGTTATCTGATTAGACCGTGTGAGGGTGGTGGATCTATTATTCATATTGTTGATCATATTGATTTAGATGTAAGTAAAAAGATTTACAAGTCAAATCATTTTAAGGTCTGGAGTGTTCCTGAAGTACTGAGGCCCCTCTATGAATCATCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACATATTAGACAAATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGTGGACGTCAACCTGCTGTTTTGAGAACATTTAGTCAGAGACTTTGCAGGGGCTTTAATGATGCTGTGAATGGGTTTGTGGATGATGGTTGGTCATTGATGGGTACTGATGGGGTGGAAGATGTCACTATTGCCATAAACTCATCTCCCAACAAATTTTTGGGGTCCAATTACAATGCATCAATGTTCCCAGCATTTGGAGGTGGGGTCCTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAGTGGGCTGATTATGGGGTTGATGCGTACTCTTCTGCATGCCTTAAAGCTAGTCCCTATGCAGTTCCATGTGCAAGACCTGGTGGCTTCCCCAGCAGCCAGGTCATATTACCCCTTGCTCATACTATTGAGCATGAAGAGTTCCTGGAGGTAGTTCGAATTGAGGGTCATGCATTTTCTCCAGAGGATGTTGCATTGGCACGTGATATGTATCTATTGCAGTTGTGCAGTGGAGTTGATGAAAATGCAATTGGGACGTGTGCTCAACTTGTATTTGCACCTATTGACGAGTCATTTGCGGATGATGCCCTTTTACTGCCGTCTGGTTTCCGTGTCATCCCATTGGATCCGAAATCAGATGGTCCAGCTGCAACAACTAGGACATTAGATTTGGCATCAACGATGGAAGTAGGATCTGGTAATGCTCGTCCATCTGGTGAAGCTGATTTGAATGGGTACAACCTTAGGTCGGTTCTTACTATTGCTTTCCAATTTACCTTTGAGAACCATATGCGGGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTTGGTTCTGTTCAGAGGGTCGCCATGGCAATTGCTCCTTCAAGGCTAAGTACCCAGCTGGGACCAAAGTCACTTCCTGGTTCACCAGAGGCCCTTACCTTAGCGCGATGGATCTGTAGAAGCTACAGGATCCACACTGGCACAGATATTTTTAGACTTGAGGCCTCAGCTGGTGATGCGATCTTGAAACAACTTTGGCACCATTCCGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCTTCTCCAGTGTTCACCTTTGCCAACCAGGCTGGGCTAGACATGCTTGAAACTACTTTGGTCGCCCTTCAAGATATAGTGCTTGATAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCACTGAGTTCTCCAAGATAATGCAACAGGGTTTTGCATACCTGCCAGCAGGGATCTGTGTATCAAGTATGAATCGGCCAGTGTCCTATGAGCAGGCCATTGCATGGAAAGTCCTCAATGATGATGATTCTAATCACTGCCTAGCCTTCATGTTCATGAATTGGTCTTTTGTATGA 2580 0.4663 MALSIHKDSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIQTASAGTTTDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRSSWYRDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPSTTFVRADMLPSGYLIRPCEGGGSIIHIVDHIDLDVSKKIYKSNHFKVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVTIAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSSACLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGTCAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPAATTRTLDLASTMEVGSGNARPSGEADLNGYNLRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWICRSYRIHTGTDIFRLEASAGDAILKQLWHHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIVLDKVLDESGRKILCTEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSFV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13779g00001 859 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Mupr13779g00001 859 Pfam START domain 167 386 IPR002913 GO:0008289
Mupr13779g00001 859 Gene3D - 9 84 - -
Mupr13779g00001 859 MobiDBLite consensus disorder prediction 128 160 - -
Mupr13779g00001 859 ProSiteProfiles START domain profile. 157 370 IPR002913 GO:0008289
Mupr13779g00001 859 CDD homeodomain 18 78 IPR001356 GO:0003677
Mupr13779g00001 859 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Mupr13779g00001 859 SUPERFAMILY Bet v1-like 426 613 - -
Mupr13779g00001 859 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 859 IPR044830 GO:0003700
Mupr13779g00001 859 Coils Coil 87 107 - -
Mupr13779g00001 859 CDD bZIP 70 109 - -
Mupr13779g00001 859 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Mupr13779g00001 859 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Mupr13779g00001 859 SMART HOX_1 15 81 IPR001356 GO:0003677
Mupr13779g00001 859 SUPERFAMILY Bet v1-like 167 366 - -
Mupr13779g00001 859 Gene3D - 200 376 IPR023393 -
Mupr13779g00001 859 SMART START_1 166 388 IPR002913 GO:0008289
Mupr13779g00001 859 CDD START_ArGLABRA2_like 161 389 - -
Mupr13779g00001 859 Pfam MEKHLA domain 714 858 IPR013978 -
Mupr13779g00001 859 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13779g00001 Mupr-Chr13779 3900 9309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13779g00001 5 859 Homeobox Transcription Factor Family AT2G34710 78.555 0.0 1387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr13779g00001 START 6.4e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13779g00001 K09338 - gmx:100779499 1609.35