LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr13779g00001	ATGGCTCTTTCTATTCACAAGGACTCAGCCAACAACCAGATGGATTCAAGCAAGTATGTGAGGTACACACCCGAGCAGGTTGAGGCCTTGGAGAGGGTCTATGCCGAATGCCCAAAGCCAAGTTCTTTGAGGAGGCAGCAACTCATCAGAGAGTGCCCCATCCTTTCCAATATTGAACCAAAACAGATCAAAGTTTGGTTCCAAAATAGAAGATGTCGCGAGAAGCAGAGGAAGGAAGCTTCTCGACTGCAGACAGTGAACAGAAAGCTGACTGCAATGAACAAGCTGTTAATGGAAGAGAATGACCGTTTGCAGAAGCAGGTTTCTCATCTGGTTTATGAGAATGGATATATGAAGCAACAGATACAAACTGCCTCTGCTGGCACCACCACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGAATCAACAGCAAAACCCAACACCTCAGCATCCCAACAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGCGTGGCAGCACGAGCCTGCGGCCTTGTGAGCCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATCGGTCGTCGTGGTATCGTGACTGCCGATGCCTTGATGTGTTGAGTATAGTCCCCACAGGGAATGGGGGCACCATAGAGCTCATGTACATGCAGACATATGCGCCCACAACTTTGGCTGCGGCGCGGGACTTCTGGACACTAAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACTTCCTCAACTGGTGGCCCCACAGGCCCTCCTTCTACAACCTTCGTAAGAGCTGATATGCTTCCTAGTGGTTATCTGATTAGACCGTGTGAGGGTGGTGGATCTATTATTCATATTGTTGATCATATTGATTTAGATGTAAGTAAAAAGATTTACAAGTCAAATCATTTTAAGGTCTGGAGTGTTCCTGAAGTACTGAGGCCCCTCTATGAATCATCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACATATTAGACAAATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGTGGACGTCAACCTGCTGTTTTGAGAACATTTAGTCAGAGACTTTGCAGGGGCTTTAATGATGCTGTGAATGGGTTTGTGGATGATGGTTGGTCATTGATGGGTACTGATGGGGTGGAAGATGTCACTATTGCCATAAACTCATCTCCCAACAAATTTTTGGGGTCCAATTACAATGCATCAATGTTCCCAGCATTTGGAGGTGGGGTCCTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAGTGGGCTGATTATGGGGTTGATGCGTACTCTTCTGCATGCCTTAAAGCTAGTCCCTATGCAGTTCCATGTGCAAGACCTGGTGGCTTCCCCAGCAGCCAGGTCATATTACCCCTTGCTCATACTATTGAGCATGAAGAGTTCCTGGAGGTAGTTCGAATTGAGGGTCATGCATTTTCTCCAGAGGATGTTGCATTGGCACGTGATATGTATCTATTGCAGTTGTGCAGTGGAGTTGATGAAAATGCAATTGGGACGTGTGCTCAACTTGTATTTGCACCTATTGACGAGTCATTTGCGGATGATGCCCTTTTACTGCCGTCTGGTTTCCGTGTCATCCCATTGGATCCGAAATCAGATGGTCCAGCTGCAACAACTAGGACATTAGATTTGGCATCAACGATGGAAGTAGGATCTGGTAATGCTCGTCCATCTGGTGAAGCTGATTTGAATGGGTACAACCTTAGGTCGGTTCTTACTATTGCTTTCCAATTTACCTTTGAGAACCATATGCGGGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTTGGTTCTGTTCAGAGGGTCGCCATGGCAATTGCTCCTTCAAGGCTAAGTACCCAGCTGGGACCAAAGTCACTTCCTGGTTCACCAGAGGCCCTTACCTTAGCGCGATGGATCTGTAGAAGCTACAGGATCCACACTGGCACAGATATTTTTAGACTTGAGGCCTCAGCTGGTGATGCGATCTTGAAACAACTTTGGCACCATTCCGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCTTCTCCAGTGTTCACCTTTGCCAACCAGGCTGGGCTAGACATGCTTGAAACTACTTTGGTCGCCCTTCAAGATATAGTGCTTGATAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCACTGAGTTCTCCAAGATAATGCAACAGGGTTTTGCATACCTGCCAGCAGGGATCTGTGTATCAAGTATGAATCGGCCAGTGTCCTATGAGCAGGCCATTGCATGGAAAGTCCTCAATGATGATGATTCTAATCACTGCCTAGCCTTCATGTTCATGAATTGGTCTTTTGTATGA	2580	0.4663	MALSIHKDSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIQTASAGTTTDNSCESVVMSGQNQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRSSWYRDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPSTTFVRADMLPSGYLIRPCEGGGSIIHIVDHIDLDVSKKIYKSNHFKVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVTIAINSSPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSSACLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGTCAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPAATTRTLDLASTMEVGSGNARPSGEADLNGYNLRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWICRSYRIHTGTDIFRLEASAGDAILKQLWHHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIVLDKVLDESGRKILCTEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSFV	859

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr13779g00001	859	FunFam	Homeobox-leucine zipper protein REVOLUTA	18	73	-	-
	Mupr13779g00001	859	Pfam	START domain	167	386	IPR002913	GO:0008289
	Mupr13779g00001	859	Gene3D	-	9	84	-	-
	Mupr13779g00001	859	MobiDBLite	consensus disorder prediction	128	160	-	-
	Mupr13779g00001	859	ProSiteProfiles	START domain profile.	157	370	IPR002913	GO:0008289
	Mupr13779g00001	859	CDD	homeodomain	18	78	IPR001356	GO:0003677
	Mupr13779g00001	859	Pfam	Homeodomain	18	76	IPR001356	GO:0003677
	Mupr13779g00001	859	SUPERFAMILY	Bet v1-like	426	613	-	-
	Mupr13779g00001	859	PANTHER	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14	14	859	IPR044830	GO:0003700
	Mupr13779g00001	859	Coils	Coil	87	107	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr13779g00001	Mupr-Chr13779	3900	9309	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr13779g00001	5	859	Homeobox Transcription Factor Family	AT2G34710	78.555	0.0	1387

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-HD-ZIP	Mupr13779g00001		START	6.4e-45	CL0209

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr13779g00001	K09338		-	gmx:100779499	1609.35

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