Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13773g00003 ATGGATGGGGCTAAATTTGCCAGATATGGAAGAACAAGGAAAACAAAGGCTATTCTTAAAACGGGTAAATTTGATTTGAATGATCTACAATGGACCAGTGATATTCCAGAGTGTCCAGTATACCACCCATTTGAGCAAGAGTTTGAGGATCCTTTTATCTATCTACAGATGATTGCTTCAGAGGCATCTAAATTTGGCATATGTAAAATCGTTTCCCCTATTACTGCCTCTATTCCTGCTGTTGACGTTTTAACCAAAGAGAAAAAGGACTTCAAGTTTGAAACTAATGTACAGCCTCTTCGGCTTTCTGAGTGGAATGAAAAAGATAAAATAACCTTTTCTATGAGGGGAAGAAACTACACGTATCATGAATTCGAGGCTCTGGCGAACGAGGTTTTTCTCAGTAAATTTCGTAATTTTGGGGGTCTTTCATCTTCATATGTGGAAAAGGAGTTCTGGCACGAGATGGCACATGGAGGGAAGGGAACAGTTGAGTATGGAATCAATATTGAGGGCAGTGCTTTTTCATGTGATCCAAAAGACAAGCTTGGAAAAAGTAAATGGAATTTGAAGAATTTCTCACGGCTGCCGCAATCCACATTGCGTTTTGTTGACAAGGAAATTCCAGGAATAACCGAACCGATGCTTTACATCGGGATGCTGTTCAGCATGTTTGCATGGCATGTAGAAGATCACTATTTGTACAGCATAAATTATCACCATTCAGGTGCAGATAAAATTTGGTATGGCGTGCCCGCTGATGCGGCTTCTCAATTTGAAAATGTTGTCTTAAATCATGTGTATTGTAATAAAATCTTATCAAAACATGGAGAGGATGGGGCTTTCCAACTTGTTGCACATAAAACAACCATGTTTCCCCCAATTATCTTGCTACAAAATGATGTGGCAGTTTACAAGGCTGTCCAGAAGCCAGGAGAGTTTGTCATCACCTTTCCTAGAGCATATCATGCTGGATTTAGCAATGGTTTTAACTGTGGGGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCACTAGGGGCTGCAGCTAGTAAGCGTTATGCCCATCTCAGAATGTTTCCTATAATTCCATACGAGGAACTTCTATGTAAAGAGGCAATGCAGATTTACAACTTCTTAAAAGTCAGAGGCTCGAACAACAGTAAGGACTTGACATCTTATCATGCCACTGTACTGTCTTTCGTGCATCTTATGCAATTTTATAAGGAGACCCTCTTGAGACTGAACGGTTCAGAAGAGTCTTCAAATAGTAGCATAGGTACCTTAATATGCCGCTACTGCCACAGAGATTGTTACGTAGCTTACATTCTATGCGAGTACTGCTATTCCTATCCGATTTGTCTTTACCATGACATTGCATCACAGAGATGCACGTGTGGGGGAAAATATACTATTTTCAAGAGGAGTGACATGTTGGAAATGGAAGATGCTGCCAAAAAATTTGAACAGGAAAAAGATATTCGGCCGAAAGTTAACGGAAAAATGAATTGTTCTTGTGGAGCAAACACTTTATCTCATTCATGTATTTTCTCCATTACCGGAAATGAACGCATGCAAGATCTCCAGAATAATCCTTGGCATGAAGAGACAAGTAGCAGAGGAACTGCTAATTCTCTTGGATCATTATCTAAACGGAGAACAAGAGAAGTGAACAACATCAAGCTCAGCCTAGAAACTATGAACAAGACAACAATGAAGCATTGTAGAAAAACAAGCCTTAGACAGTGA 1749 0.3979 MDGAKFARYGRTRKTKAILKTGKFDLNDLQWTSDIPECPVYHPFEQEFEDPFIYLQMIASEASKFGICKIVSPITASIPAVDVLTKEKKDFKFETNVQPLRLSEWNEKDKITFSMRGRNYTYHEFEALANEVFLSKFRNFGGLSSSYVEKEFWHEMAHGGKGTVEYGINIEGSAFSCDPKDKLGKSKWNLKNFSRLPQSTLRFVDKEIPGITEPMLYIGMLFSMFAWHVEDHYLYSINYHHSGADKIWYGVPADAASQFENVVLNHVYCNKILSKHGEDGAFQLVAHKTTMFPPIILLQNDVAVYKAVQKPGEFVITFPRAYHAGFSNGFNCGEAVNFAIGDWFPLGAAASKRYAHLRMFPIIPYEELLCKEAMQIYNFLKVRGSNNSKDLTSYHATVLSFVHLMQFYKETLLRLNGSEESSNSSIGTLICRYCHRDCYVAYILCEYCYSYPICLYHDIASQRCTCGGKYTIFKRSDMLEMEDAAKKFEQEKDIRPKVNGKMNCSCGANTLSHSCIFSITGNERMQDLQNNPWHEETSSRGTANSLGSLSKRRTREVNNIKLSLETMNKTTMKHCRKTSLRQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13773g00003 582 ProSiteProfiles JmjN domain profile. 38 79 IPR003349 -
Mupr13773g00003 582 SMART cupin_9 185 355 IPR003347 -
Mupr13773g00003 582 Gene3D Cupin 38 400 - -
Mupr13773g00003 582 SMART JmjN_1 37 78 IPR003349 -
Mupr13773g00003 582 PANTHER LYSINE-SPECIFIC DEMETHYLASE 31 535 - -
Mupr13773g00003 582 SUPERFAMILY Clavaminate synthase-like 114 373 - -
Mupr13773g00003 582 ProSiteProfiles JmjC domain profile. 185 355 IPR003347 -
Mupr13773g00003 582 MobiDBLite consensus disorder prediction 531 552 - -
Mupr13773g00003 582 Pfam JmjC domain, hydroxylase 215 338 IPR003347 -
Mupr13773g00003 582 Pfam jmjN domain 39 71 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13773g00003 Mupr-Chr13773 11336 14280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13773g00003 34 493 JUMONJI Transcription Factor Family AT2G34880 32.649 3.26e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr13773g00003 JmjC 2.5e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13773g00003 - - cam:101502558 771.541