Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13744g00005 ATGGTGATGATGGAGCGTGAAGGAGACAGAGAGGTGGCGGAGTCATGGACGAGTTCGAGGTCGGTGACGAAGACAGTGAACGGTTCACACACATTCGTAATAAAGGGTTACTCTCTGGCGAAGGGAATGGGCATAGGAAAATACATAGCGAGCGATGTGTTCAGCGCGGGAGGGTACGAGTGGGCCATGTTCTTCTACCCGGATGGAATGTACCCTGAAGATAACTCTACTTATGTGTCCCTCTTCATCGCACTCGTATCCCACACCACTGATGTTCGCGCACTCTTCGAACTCACCTTGTTCGATCAGAGCGGGAAAGAGAATCACAACGTTCGTAGCCACTTCCATCACTCCCCCGTGGCCGGACCCTACACTCTCAAATTTCGAGGCAGCATGGGGTATAAGCGGTTTTTCAGACGAAAACATCTCGAGAAGTCAACTTTTCTCAAGGATGACTGCTTGAAGATACATTGCACCGTTGGTGTTGTGGTGACATTCAATTCTAAGTTAAACCCAATACAGGTTCCTGAGTCTAATCTGGGGACACATTTTGGGACACTATTAGAAAATGAGCAGGGATCAGATGTTACTTTTTTGGTTGGTGGAGAAAGGTTCTATGCACATAAACTTGTTTTGGCTGCTCGCTCAACTACATTTCTAACTCAGTTTTTCAATGGAATAGAAAAAAACAATCGTGAAGTAGTTGTAATTGACATAGAACCTAAGGTTTTCAAGGCTTTGCTTCATTTTATTTATAGAGATGCTCTTATAGAAGATGAAGAGCTCTTTGTGTCTCATTCATCAATCTTACCTTCAATGATATCTGAATCGTTTGCAGCAAAATTGTTAGCTGCTGCAGAAAAGTATGGTTTAGTAAGACTTAAGTTGTTGTGCCAATCTGTACTTTGCAAAGATATATGTACAAATTCTGTTGCCTATATTCTGGATGTTGCTGATCGTTATTGTGCCACTGAACTGAAGTCCATCTGTCTAAAATATTTTGCTGCAAACGCTAGTATTGTGATGAAAACTGATGGTTTTCAGTACCTTATGGAAAACTGTCCATTGCTGAAAGAACAACTACTAAAGGCTATGACAAGATACGAGGAGAAATTTAATGAAAGAAAATGTCCTAGTATGTGGGGCCAAATTTCTAATGGTGTTGAAACCAATGATAATATT 1182 0.4171 MVMMEREGDREVAESWTSSRSVTKTVNGSHTFVIKGYSLAKGMGIGKYIASDVFSAGGYEWAMFFYPDGMYPEDNSTYVSLFIALVSHTTDVRALFELTLFDQSGKENHNVRSHFHHSPVAGPYTLKFRGSMGYKRFFRRKHLEKSTFLKDDCLKIHCTVGVVVTFNSKLNPIQVPESNLGTHFGTLLENEQGSDVTFLVGGERFYAHKLVLAARSTTFLTQFFNGIEKNNREVVVIDIEPKVFKALLHFIYRDALIEDEELFVSHSSILPSMISESFAAKLLAAAEKYGLVRLKLLCQSVLCKDICTNSVAYILDVADRYCATELKSICLKYFAANASIVMKTDGFQYLMENCPLLKEQLLKAMTRYEEKFNERKCPSMWGQISNGVETNDNI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13744g00005 394 ProSiteProfiles MATH/TRAF domain profile. 27 160 IPR002083 GO:0005515
Mupr13744g00005 394 SUPERFAMILY TRAF domain-like 24 165 - -
Mupr13744g00005 394 CDD MATH 28 160 IPR002083 GO:0005515
Mupr13744g00005 394 Gene3D Potassium Channel Kv1.1; Chain A 170 300 IPR011333 -
Mupr13744g00005 394 ProSiteProfiles BTB domain profile. 194 260 IPR000210 GO:0005515
Mupr13744g00005 394 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 361 IPR045005 GO:0016567
Mupr13744g00005 394 SMART BTB_4 194 306 IPR000210 GO:0005515
Mupr13744g00005 394 Gene3D - 305 379 - -
Mupr13744g00005 394 SUPERFAMILY POZ domain 173 304 IPR011333 -
Mupr13744g00005 394 FunFam BTB-POZ and math domain 1 170 300 - -
Mupr13744g00005 394 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 26 164 IPR008974 GO:0005515
Mupr13744g00005 394 SMART math_3 32 143 IPR002083 GO:0005515
Mupr13744g00005 394 Pfam BTB/POZ domain 186 304 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13744g00005 Mupr-Chr13744 22156 24647 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr13744g00005 BTB 1.2e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13744g00005 K10523 - gmx:100818306 536.569