Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13744g00001 AAAAAGCTGAGCCAAAGCCAGAAGTGGTCAGATTCGACCCAACAACACAACACAACACAGCGAGCGCAGATCCTCCATTTTCCTTCCCTTTCCGGGACAAAAGCCCGACATACTCACATGGTCTTGATCCGGCGCGAGATGTCCAACCCGGCGCCTCGGACCAGTTCGCGGTCGGTGACGGATACGGTGAACGGTTCGCACGAGTTCGTCATCAAAGGTTACTCTCTGGCGAAAGGAATCGGCGTCGGAAAACACATCGCCAGCGAGAATTTCACGGTGGGAGGGTACCAGTGGGCCATATACTTCTACCCGGACGGCAAGAGCCCCGAAAATAACTCCACTTACGTCTCCGTCTTCATCGCACTCGTTTCCGAAGGCATCGACGTTCGCGCCGTCTTCGAAGTCACGTTGCTCGACCAGAGCGGGAAAGGGAAGCACAAGGTTCATAGCCACTTTAATCGCTCCCTCGAGAGTGGACCCTACACTCTCAGAAACAGTGGCAGCATGGGGTATAAGCGGTTTTTCAGACGGACTCATCTTGAGGCATCGTCTTTCCTCAAGGATGACTGCTTGAAGATAAACTGTACTGTTGGTGTTGTGGTTTCGTCCATAGATTGTTGTAAGTTAAACACAATACAGGTTCCTGAGTCTGATATTGGGGCAGATTTCGGGATGCTGTTAGAGAACAAGGAGGGATCAGATGTTACTTTCTCTGTTGGTGGAGAAAGGTTTCATGCACATAAGCTTGTTTTAGCTGCTCGGTCAACTGCATTTGAAACTCAGTTTTTTAATGGCATGGAGGAAGATGATCGGGACATAGTTGTTACTGACATGGAACCTAAGGCTTTGCTTCATTATATTTATAGAGACACACTTATAGAGGATGAAGAGCTCTTAATGTCTTGTTCATCATTCTTGCCTTTGGTATCTGAATCATTTGCAGCAAAGTTGTTAGCTGCCGCCGAAAAGTATGGTTTGCCAAGACTTAAGTTGCTTTGCGAATCTGTACTTTGCAAAGACATATCTATAGATTCTGTTGCCTATATACTGGTTCTTGCTGATCGATATCGTGCCACCGAAATGAAGTCCATCTGTCTACAGTTTTCTGCCGAAAACCTTGATGCTGTGATGCAAACTGATGGATTCGAGTATCTTAAGGAGAATTGCCCATTGCTGCAATCAGAACTGCTAAAGACTGTGGCAGGACGCGAGGAGGAATTTAGTAGAGAAGGAAATTTTAGAACTCTGTGGGGCCAATTTTCTGATTGTGGTGATACCATTGATAGGAGTGTGAGACAACGACTCTGGGATAATGGAGTCGATATAAGTCAAAGCTCATCATCGGTTCCCCATCCTGATGGTGTTAGCAACAATGATGTGTTG 1383 0.4671 KKLSQSQKWSDSTQQHNTTQRAQILHFPSLSGTKARHTHMVLIRREMSNPAPRTSSRSVTDTVNGSHEFVIKGYSLAKGIGVGKHIASENFTVGGYQWAIYFYPDGKSPENNSTYVSVFIALVSEGIDVRAVFEVTLLDQSGKGKHKVHSHFNRSLESGPYTLRNSGSMGYKRFFRRTHLEASSFLKDDCLKINCTVGVVVSSIDCCKLNTIQVPESDIGADFGMLLENKEGSDVTFSVGGERFHAHKLVLAARSTAFETQFFNGMEEDDRDIVVTDMEPKALLHYIYRDTLIEDEELLMSCSSFLPLVSESFAAKLLAAAEKYGLPRLKLLCESVLCKDISIDSVAYILVLADRYRATEMKSICLQFSAENLDAVMQTDGFEYLKENCPLLQSELLKTVAGREEEFSREGNFRTLWGQFSDCGDTIDRSVRQRLWDNGVDISQSSSSVPHPDGVSNNDVL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13744g00001 461 Gene3D - 340 410 - -
Mupr13744g00001 461 SMART math_3 69 180 IPR002083 GO:0005515
Mupr13744g00001 461 Gene3D Potassium Channel Kv1.1; Chain A 209 335 IPR011333 -
Mupr13744g00001 461 MobiDBLite consensus disorder prediction 1 27 - -
Mupr13744g00001 461 SUPERFAMILY TRAF domain-like 61 199 - -
Mupr13744g00001 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 54 397 IPR045005 GO:0016567
Mupr13744g00001 461 SMART BTB_4 233 341 IPR000210 GO:0005515
Mupr13744g00001 461 CDD MATH 65 197 IPR002083 GO:0005515
Mupr13744g00001 461 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 63 201 IPR008974 GO:0005515
Mupr13744g00001 461 SUPERFAMILY POZ domain 211 341 IPR011333 -
Mupr13744g00001 461 ProSiteProfiles BTB domain profile. 233 296 IPR000210 GO:0005515
Mupr13744g00001 461 MobiDBLite consensus disorder prediction 1 28 - -
Mupr13744g00001 461 ProSiteProfiles MATH/TRAF domain profile. 64 197 IPR002083 GO:0005515
Mupr13744g00001 461 Pfam BTB/POZ domain 225 339 IPR000210 GO:0005515
Mupr13744g00001 461 CDD BACK_AtBPM-like 338 399 IPR034090 -
Mupr13744g00001 461 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13744g00001 Mupr-Chr13744 1076 4101 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr13744g00001 BTB 4.6e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13744g00001 K10523 - gmx:100809683 686.797