Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13737g00001 ATGGCTTCGTCTAATGGTGGTGTGCCTCCGGGATTTCGATTTCATCCAACGGATGAAGAGCTGCTTCATTACTACTTGAAGAAGAAGGTTTCCTTTCAGAAGTTTGACATGGATGTTATCAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGATTTGCAAGAAAGATGTAGAATTGGATCAACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTATCCTACAGGTTCAAGGACTAATAGAGCAACGAATGCAGGATTTTGGAAAGCAACAGGAAGAGATAAGTGCATTAGGAATACCTACAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGAAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCACGAGTACCGCCTAGAAGAAGGCAATGATCCTCAAGGAAGTGCTAATGAAGATGGTTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAACTTATTCAAGATTGGAAATGAAGGTGGCTCTACACATAATCCAGATCAACAAATCAACAATTCCTCAAGCACCAATGCACGATCCTTCATGCATAGAGAAAATCATTACTTACTACATCAACAACAAAATCCTAGGAACTCATCAGGAATTGAGCTTGATAAGCCTGAGCTCGCTCTCCATTACCCACATTTGCAAAATCCTCAATACTCACTCTTCCAGTCTCAACCTCTTCTTCAGACCCAAAAACCTATGGTTTATGATTATTCATATACATCGTCTCTACCTTCAGACACCCCTATCATGGCAAAGCAACTCATGACAAACCCTAGAGATTGTGAGAGTGGTAGTGACGGCCTAAGATATCAAGTTTCGGAGTCTGGTATGGAAGTTGGCTCGTGTGAACCAAATCAAGAAATAGGTGGCGGAAGAGGTGAAGGAATAAATGAATGGGGTGTTCTTGATAGGCTAGTAACCTCTCATCTTGGAAATGAAGACTCAAACAAAGGGGTCAGGTTTGAGGAGGCAAATCCACAATCTGTACACCAGATCAACCAACTTTCATTACGGGGAGAGATGGACTTCTGGGCCTATGGAAAACAATAA 1086 0.4208 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEEGNDPQGSANEDGWVVCRVFKKKNLFKIGNEGGSTHNPDQQINNSSSTNARSFMHRENHYLLHQQQNPRNSSGIELDKPELALHYPHLQNPQYSLFQSQPLLQTQKPMVYDYSYTSSLPSDTPIMAKQLMTNPRDCESGSDGLRYQVSESGMEVGSCEPNQEIGGGRGEGINEWGVLDRLVTSHLGNEDSNKGVRFEEANPQSVHQINQLSLRGEMDFWAYGKQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13737g00001 361 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Mupr13737g00001 361 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Mupr13737g00001 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 216 - -
Mupr13737g00001 361 FunFam NAC domain-containing protein 17 163 - -
Mupr13737g00001 361 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Mupr13737g00001 361 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13737g00001 Mupr-Chr13737 2932 5990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13737g00001 1 355 NAC Transcription Factor Family AT1G33280 55.278 3.23e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr13737g00001 NAM 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13737g00001 - - gmx:100804181 711.835