Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13721g00003 ATGAGTGACAAGGAAAAGTTTGAGGTGGATAGAAACGGGGATCCTATGAGTTATTCTAGTGGTATGCACTCTGATTGGAGATTTGGGGGTGCAAATATTGCAAATTCTTCTGTAGGTTTGGTTGCCATGGGGAATTCTATGAATGTGAGCAGAGGGGATTTGATTGGTTCCTCTTCATGTTCCTCTGCTTCAATGGTGGACTCATTTGGTCCAAACTACTGGGACAACCCCACCAGTTCCCAAAACCTGGGATTTTGTGACATTAATGTCCACAACAATGGGGGCTCTTCAAACACTACTGGAATCAGAAAAGATGGCTTTGGCTTTGGAAGAGCTGGTCAGGATCATCATCATCATCATGGAACACTTGAAATGGGTTGGAATCCTGCTAATTCCATGTTACCAAATGGACCAGGGATGTTTCCCCACAGTTTATCTCAGTTTCCAAGTGATTCTGGATTCATTGAGAGAGCTGCAAGATTCTCATGCTTCAGTGGAGGGAATTTTGGTGATATGGTGAACTCATATGGGATTCCTCAATCCATGGGGCTGTATGCTGGGAGTGGTGGCACAATGCATGGAGCAAGAGATGCTAATGCAGTTGTAGGCCTTGGGTTGAAGTCAGTAATTGGAGGACAATCTCAGGAAAGTGATCTAAATGTAGTTGAAGCTACCAAAGATGTGTCTCCATCTGTTGAGCATCTGGCTCCTAAAGGAAGCCCTCTCAAGAGTGATAAAAGGAGTGAAAGTCATGCTATGTCTCAAGATGAAGGGAAGCAGTCTCTTGTTAGGCCTGCTAATGAGTCTGATAGGGCTGAATCTAGTGACGATGATGGTGGCGGTGGTGGCCAAGATGATTCTCCAATGTTGGAGGGTACTAGTGGGGAACCTTCAATCAAGGGACTAAACTCAAAGAAAAGGAAAAGAAGTGGGCAGGATGCTGATAATGATAAAGCCAATGGAGCTCCAGAGCTACCTAGTGAAGGTGCAAAGGACAACTCTGAGAATCAACAGAAGGGGGACCAACAACCAACTTCAACAACCAAGGCTTCTGGGAAGAATACCAAACTGGGGTCTCAATTTTCTGATCCACCTAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCCACGAATAGCCATAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGTGAGAGGATGAAGTTTCTTCAAGACCTAGTGCCAGGATGTAGCAAGGTCACTGGCAAGGCAGTAATGCTAGACGAAATCATCAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATTGAAGGACTTCTTGCTAAAGATATTCTTCAACAACGGCCTGGTCCTTCCGCACTAGGGTTTCCTCTAGATATGTCCATGGCCTTTCCTCCATTGCATCCATCTCAACCAGGGCTGATTCATCCAATCATTCCCAACATGGCAAACTCGTCTGATATCCTTCATAGAACCATCCATCCACAGTTAGCACCCTTGAATGGTTTATTCAAGGAGCCAAATCAGCTTCCTGATGTGTGGGAGGATGAGCTTCACAATGTTGTACAGATGAGCTTTGCAACAACTGCTCCCATGAGTAGCCAAGATGTTGATGGTACTGTGTCAGCAAGTCAGATGAAAGTTGAACTTTGA 1695 0.4496 MSDKEKFEVDRNGDPMSYSSGMHSDWRFGGANIANSSVGLVAMGNSMNVSRGDLIGSSSCSSASMVDSFGPNYWDNPTSSQNLGFCDINVHNNGGSSNTTGIRKDGFGFGRAGQDHHHHHGTLEMGWNPANSMLPNGPGMFPHSLSQFPSDSGFIERAARFSCFSGGNFGDMVNSYGIPQSMGLYAGSGGTMHGARDANAVVGLGLKSVIGGQSQESDLNVVEATKDVSPSVEHLAPKGSPLKSDKRSESHAMSQDEGKQSLVRPANESDRAESSDDDGGGGGQDDSPMLEGTSGEPSIKGLNSKKRKRSGQDADNDKANGAPELPSEGAKDNSENQQKGDQQPTSTTKASGKNTKLGSQFSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSALGFPLDMSMAFPPLHPSQPGLIHPIIPNMANSSDILHRTIHPQLAPLNGLFKEPNQLPDVWEDELHNVVQMSFATTAPMSSQDVDGTVSASQMKVEL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13721g00003 564 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 378 428 IPR011598 GO:0046983
Mupr13721g00003 564 MobiDBLite consensus disorder prediction 239 254 - -
Mupr13721g00003 564 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 376 447 IPR036638 GO:0046983
Mupr13721g00003 564 MobiDBLite consensus disorder prediction 263 278 - -
Mupr13721g00003 564 CDD bHLH_AtBPE_like 368 453 - -
Mupr13721g00003 564 Pfam Helix-loop-helix DNA-binding domain 381 429 IPR011598 GO:0046983
Mupr13721g00003 564 MobiDBLite consensus disorder prediction 301 315 - -
Mupr13721g00003 564 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 252 481 IPR024097 GO:0006355
Mupr13721g00003 564 Gene3D - 375 448 IPR036638 GO:0046983
Mupr13721g00003 564 FunFam Basic helix-loop-helix transcription factor 375 447 - -
Mupr13721g00003 564 SMART finulus 384 434 IPR011598 GO:0046983
Mupr13721g00003 564 MobiDBLite consensus disorder prediction 226 365 - -
Mupr13721g00003 564 MobiDBLite consensus disorder prediction 330 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13721g00003 Mupr-Chr13721 16878 19611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13721g00003 56 540 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.076 1.84e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr13721g00003 HLH 7.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13721g00003 - - gmx:100797720 951.429