Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13712g00002 ATGGAGTGGGACAGCAATTCCGATCTGAGCGGGGACGAAGAGGAAGGCTTCGTCCTCAACGCTGCCGCCGACGGTCCTCTCCCCTTCCCCTTCCCCGTCGGCAACCTTCTCCAAACGGCGCCCTGTGGCTTCACCGTTACCGACGCCCTCGACCCTGACCACCCTATCATTTACGTCAACACTGTCTTCGAGATCGTCACCGGCTACCGCGCCGAAGACTGTCGAGGTCCATTTGCTAAGAGAAGGCATCCGTTGGTGGACTCAACAGTAGTTTCAGAAATTAGAAGATGCCTTGAAGAGGGGATTGAATTCCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCTCCTCTGATGAACAGATTGCAGCTGACACCCATATATGGAGATGATGAGACTATAACACATGTCATTGGAATCCAGTTCTTCACAGAGGCAAACATTGATCTTGGTCCTGTTCCAGGTTCTACAATTAAGGAATCTGCTAAATCATCTGATCGATTTCGTTCTGTGCTTTCCTCGTTGCATACACTTCCAGTGGGGGACAGGAATGTATCTCGTGGAGTTTGTGGGATTTTGCAATTGAGTGATGAGGTACTGTCTCTCAAGATACTTGCTCGATTAACTCCTAGAGATATTGCATCAGTTAGCTCTGTCTGTAGACGATTATATGATCTGACAAAAAATGAAGACCTCTGGAGAATGGTGTGCCAAAATGCATGGGGCAGTGAGACTACACGTGTTTTGGAGACTGTGCCTGGTGCAAGGAGACTTGGATGGGGTCGGCTGGCAAGGGAATTGACCACTCTTGAAGCAGCAGCATGGAGGAAGTTGACTGTTGGAGGTGCTGTTGAACCCTCGCGCTGTAATTTTAGTGCTTGTGCAGTTGGTAATAGAATTGTGTTATTTGGTGGTGAAGGGGTTAACATGCAACCTATGAATGACACCTTGGTATTGGATCTCAATTCTAGTAGTCCTGAGTGGCAACACGTCCAGGTAAGCTCTCCTCCTCCTGGTCGCTGGGGCCACACACTTTCTTGTGTTAACGGTTCTCATTTGGTTGTATTTGGAGGCTGTGGAAGGCAGGGCTTGCTCAATGATGTGTTTGTTCTGGACCTGGATGCAAAGCCTCCAGCTTGGCGTGAAATTTCTGGACTGGCACCTCCACTTCCCAGATCATGGCACAGCTCCTGTACTCTTGATGGTACTAAGTTGATAGTTTCTGGGGGATGTGCAGACTCTGGAGTACTCTTGAGTGACACTTTTCTCCTTGATTTGTCAATGGAGAAGCCTGTCTGGAGAGAGATACCAGTGGCATGGACCCCACCATCTCGTCTGGGACACACATTGTCTGTTTATGGTGGTAGGAAAATACTGATGTTTGGGGGTCTGGCCAAGAGTGGGCCCTTGCGTTTTCGTTCCAGTGATGTATTCACGATGGATTTAAGTGAGGAAGAACCTTGTTGGAGATGTGTAACGGGGAGTGGCATGCCTGGTGCTGGAAATCCTGGGGGCATAGCTCCTCCACCTAGACTTGATCATGTTGCTGTTAGCCTTCCAGGTGGGAGAATTCTAATATTTGGTGGATCTGTTGCTGGTCTTCACTCTGCCTCTCAGCTTTACATTCTTGATCCAACTGATGAGAAGCCTACATGGAGAATCCTAAATGTACCTGGGCGTCCTCCAAGATTTGCTTGGGGACATAGTACATGTGTTGTTGGAGGGACAAGAGCTATCGTACTGGGTGGTCAAACTGGGGAGGAATGGATGCTAAGCGAGCTCCATGAACTTTCTCTGGCAAGTTCTGTCGTCTAA 1815 0.4876 MEWDSNSDLSGDEEEGFVLNAAADGPLPFPFPVGNLLQTAPCGFTVTDALDPDHPIIYVNTVFEIVTGYRAEDCRGPFAKRRHPLVDSTVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLQLTPIYGDDETITHVIGIQFFTEANIDLGPVPGSTIKESAKSSDRFRSVLSSLHTLPVGDRNVSRGVCGILQLSDEVLSLKILARLTPRDIASVSSVCRRLYDLTKNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRIVLFGGEGVNMQPMNDTLVLDLNSSSPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPAWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSVV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13712g00002 604 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 13 601 - -
Mupr13712g00002 604 Pfam Kelch motif 512 559 IPR011498 GO:0005515
Mupr13712g00002 604 Pfam Kelch motif 445 496 IPR011498 GO:0005515
Mupr13712g00002 604 ProSiteProfiles F-box domain profile. 203 236 IPR001810 GO:0005515
Mupr13712g00002 604 FunFam Adagio protein 1 189 236 - -
Mupr13712g00002 604 Pfam PAS domain 42 141 IPR000014 -
Mupr13712g00002 604 SUPERFAMILY PYP-like sensor domain (PAS domain) 37 141 IPR035965 -
Mupr13712g00002 604 Gene3D PAS domain 26 152 - -
Mupr13712g00002 604 CDD PAS 49 140 IPR000014 -
Mupr13712g00002 604 SUPERFAMILY F-box domain 184 253 IPR036047 GO:0005515
Mupr13712g00002 604 SUPERFAMILY Galactose oxidase, central domain 275 589 IPR011043 -
Mupr13712g00002 604 Gene3D - 266 468 IPR015915 GO:0005515
Mupr13712g00002 604 FunFam Putative LOV domain-containing protein 265 469 - -
Mupr13712g00002 604 NCBIfam PAS domain S-box protein 51 140 IPR000014 -
Mupr13712g00002 604 SMART fbox_2 195 236 IPR001810 GO:0005515
Mupr13712g00002 604 Pfam Galactose oxidase, central domain 352 399 - -
Mupr13712g00002 604 CDD F-box_AtADO-like 191 237 - -
Mupr13712g00002 604 Pfam F-box-like 200 238 IPR001810 GO:0005515
Mupr13712g00002 604 Gene3D - 188 236 - -
Mupr13712g00002 604 FunFam Putative LOV domain-containing protein 470 603 - -
Mupr13712g00002 604 Gene3D - 469 602 IPR015915 GO:0005515
Mupr13712g00002 604 Pfam Galactose oxidase, central domain 288 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13712g00002 Mupr-Chr13712 27278 31023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13712g00002 33 142 AGC Kinase Gene Family AT5G58140 26.126 2.58e-07 52.0