Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13706g00001 ATGGGTCATCATTCTTGCTGCAACCAACAGAAGGTTAAGAGAGGCCTTTGGTCTCCCGAGGAAGATGAGAAACTCATTCGATACATTACAACTCATGGATATGGCTGTTGGAGTGAAGTTCCAGAGAAAGCTGGGCTTCAAAGGTGTGGCAAGAGTTGTCGCTTGAGATGGATTAATTATTTGAGACCTGATATTAGAAGAGGCAGGTTTACACCTGAGGAGGAGAAGTTAATTATAAGTCTTCATGGAGTCGTAGGCAACAGATGGGCTCACATTGCGAGCCACTTGCCTGGTAGAACTGACAATGAAATAAAAAACTATTGGAACTCATGGATAAAGAAGAAAATAAGAAAGACTTCGGTGTCTTCAACCACCATTGCACAAAGCATGGATCATAATTCTTCCCAGTTCAATTACAGTTCCAACCTACTAGACCACTTTTCCACCCAAGATAATAATAATCTACAAGCAAAGCCACCGGTTCAAGAACCCTTGTTTTCCTCAACATGCCCTCTGTTCATGTTTGACACTAGTTCACTAGAAAGCGCAGCAACAACATTAGAGTGCAATAGTGTGCGAGCGGAACAGTTCCAAGATGCTGTGGGTTTGAGCAGTGAAACGTGGAACCTGAGTCACCACCAGGTTCAGGCACTTGCTCCTCTCACAGTGACCGTAGGTTTGGACAGCACAAACTATTTGCCACCATTGATAGAAAACGTGGAGAACATGGTCCCAATTGAGGTACAATCTTGTAGTATGGAGGAGCAAGGAGATATAGCACTAGAGTGCTTGCGGAGGCAAGAGTTGAATGAATGGGTGGAAACGCAGCAACAATGTCCTAACTTTCTTTTTTGGGACAGTGTTGAAGGACAACTTGGTGGGGAAGAACTAGCACCAAATTCATCAAATGTGGAAGCAAATACTACACTTTCTCCTTTTCCTTCGTCTTTGTGA 954 0.4361 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKTSVSSTTIAQSMDHNSSQFNYSSNLLDHFSTQDNNNLQAKPPVQEPLFSSTCPLFMFDTSSLESAATTLECNSVRAEQFQDAVGLSSETWNLSHHQVQALAPLTVTVGLDSTNYLPPLIENVENMVPIEVQSCSMEEQGDIALECLRRQELNEWVETQQQCPNFLFWDSVEGQLGGEELAPNSSNVEANTTLSPFPSSL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13706g00001 317 FunFam MYB transcription factor 6 66 - -
Mupr13706g00001 317 CDD SANT 69 112 IPR001005 -
Mupr13706g00001 317 Gene3D - 6 66 - -
Mupr13706g00001 317 CDD SANT 17 61 IPR001005 -
Mupr13706g00001 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr13706g00001 317 PANTHER MYB DOMAIN PROTEIN 55 1 235 - -
Mupr13706g00001 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr13706g00001 317 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr13706g00001 317 SMART sant 66 114 IPR001005 -
Mupr13706g00001 317 SMART sant 13 63 IPR001005 -
Mupr13706g00001 317 MobiDBLite consensus disorder prediction 296 317 - -
Mupr13706g00001 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr13706g00001 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr13706g00001 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr13706g00001 317 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr13706g00001 317 Gene3D - 69 141 - -
Mupr13706g00001 317 FunFam Transcription factor MYB26 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13706g00001 Mupr-Chr13706 1786 4115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13706g00001 1 300 MYB Transcription Factor Family AT1G63910 50.565 3.05e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr13706g00001 Myb_DNA-binding 4.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13706g00001 K09422 K02947 gmx:100803556 521.931