Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13702g00007 ATGCTTGACACTTTGTCATTTAACATGGAACTTAATTTTAAGCACCAACTTAGCCTTTTCTGTGTCACACTGCTCTTACCTGCCTTGTGTACCTCTCAGGACTCTTTTACTTGCTCAAGAGCAACCTATTATGGTAGCCCAGATTGTTATGGAAATCCAAGGGGAGCTTGCGGCTTTGGTGAATATGGAAAAACAGTAAACGATGGCAATGTCGCAGGCGTGTCTTGGCTATGGAAGAATGGATCTGGCTGTGGAGCATGTTATCAGGTTAGGTGCAAAATACCCCAATTCTGCGATGAGAATGGAGCATACGTGGTGGTGACGGATTATGGCGAGGGAGACAGAACAGACTTTATAATGAGTCCACGTGGCTATTCAAGATTGGGGAGAAACGCAGATGCATCTGCAGAGCTTTTCAAATACGGTGTGGTGGACGTAGAATACAGAAGGGTCCCTTGTAGATACGGTGGCTATAACCTCTTGCTTAAGGTCCATGAGCACAGCAGAAACCCTCACTACTTAGCCATTCTCATTCTCTATCTTGGTGGAACTTACGACGTAACTGCTGTTGAGTTGTGGCAGGAAGATTGCCAAGAATGGAGGAGAATGCGGAGGGTATTTGGGACGGTGTTTGACGCTGAGAACCCGCCAAGGGGTGACATCAAGTTGAGGTTCCAATTGAGTGGTAATGCAGGCCAATATTGGGTGCAGTCCAAGAATGTTATCTCTAGTGATTGGGAGGCCGTTTCTCCATTGCTGGTGGTTATGTCATGCATATATGGCATTGGGTCACTTAAATTAATATCAAATGCCTCCAATGAACCAAGCAAAGCCGTCATTGGTTTACGATCAACAACTCTGACAAGAACACTAGTGGAACGATATGACCTGTTTCGAGGTGTCAGATCGCGCTACCTCACCCAACGTGGC 930 0.4613 MLDTLSFNMELNFKHQLSLFCVTLLLPALCTSQDSFTCSRATYYGSPDCYGNPRGACGFGEYGKTVNDGNVAGVSWLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRGYSRLGRNADASAELFKYGVVDVEYRRVPCRYGGYNLLLKVHEHSRNPHYLAILILYLGGTYDVTAVELWQEDCQEWRRMRRVFGTVFDAENPPRGDIKLRFQLSGNAGQYWVQSKNVISSDWEAVSPLLVVMSCIYGIGSLKLISNASNEPSKAVIGLRSTTLTRTLVERYDLFRGVRSRYLTQRG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13702g00007 310 Gene3D - 27 153 IPR036908 -
Mupr13702g00007 310 Pfam Lytic transglycolase 71 148 IPR009009 -
Mupr13702g00007 310 Gene3D - 154 250 IPR036749 -
Mupr13702g00007 310 SUPERFAMILY PHL pollen allergen 160 247 IPR036749 -
Mupr13702g00007 310 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 248 IPR007117 -
Mupr13702g00007 310 Pfam Expansin C-terminal domain 163 242 IPR007117 -
Mupr13702g00007 310 CDD DPBB_EXLB_N 39 153 - -
Mupr13702g00007 310 PRINTS Expansin/Lol pI family signature 74 92 IPR007118 GO:0005576
Mupr13702g00007 310 PRINTS Expansin/Lol pI family signature 141 157 IPR007118 GO:0005576
Mupr13702g00007 310 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Mupr13702g00007 310 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Mupr13702g00007 310 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 158 IPR007112 -
Mupr13702g00007 310 PANTHER EXPANSIN-B3 22 248 - -
Mupr13702g00007 310 SUPERFAMILY Barwin-like endoglucanases 22 157 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13702g00007 Mupr-Chr13702 53111 55499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13702g00007 22 248 Expansin Gene Family AT4G17030 64.035 3.98e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13702g00007 - - ccaj:109800044 506.908