Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13701g00001 ATGAAAAAGAGGCAGGTGGTGGTGAAAAGAGAATATGCCACGTCATCATCATCGGTGGGAAATGTTCGATACGGGGAGTGCCAGAAGAATCATGCGGCGAACACGGGGGGTTATGCTGTGGACGGTTGCAGGGAATTCATGGCCAGCGCGGGTGAAGGAACGAGTGCGGCGCTTACGTGTGCAGCTTGCGGCTGCCACAGGAACTTCCACAAAAGGGAAGTACTGCACGGCCTAATTACGCTCCTTTCTCATCTTGGAACCTTTTCTCATCACCCAAAAATAGGTGGGACTCTTAGATAA 300 0.5167 MKKRQVVVKREYATSSSSVGNVRYGECQKNHAANTGGYAVDGCREFMASAGEGTSAALTCAACGCHRNFHKREVLHGLITLLSHLGTFSHHPKIGGTLR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13701g00001 99 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 23 74 IPR006456 -
Mupr13701g00001 99 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 76 - -
Mupr13701g00001 99 Pfam ZF-HD protein dimerisation region 21 74 IPR006456 -
Mupr13701g00001 99 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 24 73 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13701g00001 Mupr-Chr13701 2913 3668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13701g00001 1 83 Zinc finger-homeobox gene family AT1G18835 67.059 2.35e-31 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr13701g00001 ZF-HD_dimer 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13701g00001 - - gmx:100797273 158.688