Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13691g00001 GTCACGGCGTCGTTTCACGAGAGGCGTGAAGAGCGCAATAGAGCGAGCAGAGTGAAGAGAAAAGAGAAAATGTTGAAGCTATCTCGCGTGCTTCCTCTCACTTCCACTTCCAGGCATCAACTGTTGGAAGTGCTGTCGTTTAGGAACGCTGAAGCTGCTATTTCTACTGCAACAAATAATTATGCTGCTAAAGGCATTGCTTTATACATTACGAACGGCAAAGCTGCATTCTCGTTGAGTCCTTGCCTTCCGACTTTCACTAAGTTGGATTCTGGGACTGTTGTAGTTGATCGACGCGGTTCAATGATGATGATTTTCATGCATTCTATTGGAGAGCGCAAATATGACTGGGAGAAGAGACAGAGATTTGCTCTCTCTGCCACTGAAGTTGGCTCTTTGATAACCATGGGCCCTCAAGATTCCTGTGAATTCTTTCATGACCCGTCAATGTTATCAAGTAATGCTGGTCAAGTAAGGAAGAGCTTATCAATTAAGCCTCATACAAACAACAATGGCTACTTTGTGTCTTTGACTGTTGTCAACAACCTGTTAAACACCAAAGACCACTTCACTGTTCCTGTCACAACTGCTGAGTTTTCTGTAATGAAGACAGCTTGCAGTTTTGCATTGCCACGCATTATGGGTTGGGACCAGATAACTAATCAGCAATCCAGAGGCACAGTTGGCCTTCAACCGAAGGGTGGCTCTCAAGTTTTAGACTTGGAATGGGAAAAATGA 738 0.4431 VTASFHERREERNRASRVKRKEKMLKLSRVLPLTSTSRHQLLEVLSFRNAEAAISTATNNYAAKGIALYITNGKAAFSLSPCLPTFTKLDSGTVVVDRRGSMMMIFMHSIGERKYDWEKRQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHTNNNGYFVSLTVVNNLLNTKDHFTVPVTTAEFSVMKTACSFALPRIMGWDQITNQQSRGTVGLQPKGGSQVLDLEWEK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13691g00001 245 Pfam Whirly transcription factor 72 204 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mupr13691g00001 245 SUPERFAMILY ssDNA-binding transcriptional regulator domain 70 223 IPR009044 GO:0003677|GO:0006355
Mupr13691g00001 245 Gene3D Transcriptional Coactivator Pc4; Chain A 67 226 IPR009044 GO:0003677|GO:0006355
Mupr13691g00001 245 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 28 245 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13691g00001 Mupr-Chr13691 483 3969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13691g00001 70 245 Whirly Transcription Factor Family AT1G71260 62.431 1.49e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mupr13691g00001 Whirly 1.2e-51 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13691g00001 K26561 - gmx:100817863 354.755