Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1368g00001 ATGGCAAGATCAAGTGCAAAGGCAGAATATAGAGCTATGGCCCAAGGGTTGACAAATATGTTTACCAAGGGACTTTCCACAAAGCGCCGAGAAACTGGTGCATTAAGTAGAATAATTGATCGTGGTAGCCGTGCGATAAATTTCATTCTCTCCTCTATGGTATTCAATGTAGTACCCACCATATTAGAGGTACGCCTCAGTTATTCCCTTGTTGCTTACCTCAATGATATATCTTTGGTATCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCGTTGATTACTTCCTTGTCAGTTGCTGCTTATGTTATTTTTACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAAAGCCATGAATAAGGCTGATAATGATGCTAGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAATAATGAAGTTTATGAAGCTGATAGCTATGACAAGTACCTAAAAAGGTATGAGGATGCTGCTCTGAAAACCCAACGCAGTCTTGCTTTGTTGAACTTTGGGCAAAATGTTATATTTAGTACTGCTCTTTCAACAGCAATGGTGCTGTGCTCTCAGGGGATCACAAATGGCACTATGACTATTGGTGATTTGGTAATGGTGAATGGGCTTCTCTTCCAACTATCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTCTAGTTGACATGAAGTCCATGTTTCAGTTACTAGAGGAAAGAGCAGACATTAGAGATAAAGAAAATGCAAAGCCTCTGAGATTCAATGGGGGGAGAATCCAAATGGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCACTTGTTGTACCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAGTCAACCATTCTTAGATTACTATTCAGGTTCTTCGATCCTCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTAGGCTTTCTGCAACAAAAGAGGAGGTCTATGGAGCTGCTCAGAAAGCAGCAATTCATGACACTATCATGAATTTTCCTGATAAATATTCAACTGTTGTGGGAGAGCGAGGACTCAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCCTAGCTCGTGCATTCTTAAAAGCACCTGCAATACTGTTGTGCGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGATATTTTAAGTTCGTTAAAGTCAGTATCAAATAATCGGACTTCAATATTCATTGCACACAGGCTTACCACTGCAATGCAGTGTGACGAGATCATTGTTTTGGAAAATGGGAAGGTGATTGAGCAAGGGTCCCATGAAGTGCTCTTATCAAAAGCAGGAAGATATGCACAGCTGTGGGGAAAGCAAAATAACACTATTGATGCAATTGATACAGCCATCAAGCTGGAAGCATAA 1560 0.3994 MARSSAKAEYRAMAQGLTNMFTKGLSTKRRETGALSRIIDRGSRAINFILSSMVFNVVPTILEVRLSYSLVAYLNDISLVSGILAYKFGAPFALITSLSVAAYVIFTLTITQWRTKFRKAMNKADNDASTRVIDSLINYETVKYFNNEVYEADSYDKYLKRYEDAALKTQRSLALLNFGQNVIFSTALSTAMVLCSQGITNGTMTIGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAKPLRFNGGRIQMENVHFSYLTERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDDQDIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYGAAQKAAIHDTIMNFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEADILSSLKSVSNNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHEVLLSKAGRYAQLWGKQNNTIDAIDTAIKLEA 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1368g00001 519 CDD ABC_6TM_ATM1_ABCB7 6 243 - -
Mupr1368g00001 519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 235 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1368g00001 519 Pfam ABC transporter transmembrane region 79 222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1368g00001 519 SMART AAA_5 294 480 IPR003593 GO:0016887
Mupr1368g00001 519 FunFam ABC transporter B family member 25 261 515 - -
Mupr1368g00001 519 Pfam ABC transporter 285 434 IPR003439 GO:0005524
Mupr1368g00001 519 ProSitePatterns ABC transporters family signature. 406 420 IPR017871 GO:0005524|GO:0016887
Mupr1368g00001 519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 269 503 IPR003439 GO:0005524
Mupr1368g00001 519 CDD ABCC_ATM1_transporter 269 504 - -
Mupr1368g00001 519 Gene3D - 261 515 IPR027417 -
Mupr1368g00001 519 Gene3D ABC transporter type 1, transmembrane domain 1 259 IPR036640 GO:0005524|GO:0016020
Mupr1368g00001 519 SUPERFAMILY ABC transporter transmembrane region 21 248 IPR036640 GO:0005524|GO:0016020
Mupr1368g00001 519 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 500 IPR039421 -
Mupr1368g00001 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 504 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1368g00001 Mupr-Chr1368 3421 22965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1368g00001 105 500 Calmodulin-binding Proteins AT2G36910 37.346 2.18e-67 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1368g00001 K05662 - gmx:100779975 867.84