Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13686g00001 CTTCCTGTTAACCAGAGCAAACACTCTGTTCAGAACCTTCCTTCGCTTCTCTCGTTCATGGAGCTTCAGAGGCGCCAAGACCAGAGCCTCTCCCAGCGGAAGGGCCAGAAGCGGAAGCTCGACGAGGAACAGCACCAGGAGCGGCAGATCTCGGCGGCGCCGTCCACCGCCGACGAGCGCGCGGCGCTTCTCTCCGACATCACCGAACAGGTGAGCATCCTCGAGTCGACTTTCACGTGGAACGAAGCGGATCGATCCGCGGCCAAGCGCGCCACTCACGCGCTCGCCGATCTCGCGAAGAACGAGGAAGTGGTGAACGTGATTGTTGAAGGAAGCGCGATTCCGGCTTTGGTGAAGCATCTTCAGGCGCCGCCTCTGAGTGACTGTATCCAGAATCCATTGCCGTTCGAGCACGAGGTTGAGAAAGGGAGCGCTTTCGCACTAGGACTTCTTGCCGTCAAGCCTGAACATCAACAGCTCATTGTTGACAATGGTGCCTTAACACGTCTTGTTGATCTTTTAAAGAGGCACAAGAATGGCTTAACTTCTCGTGCTATTAATAGTCTCATTCGTAGGGCTGCAGATGCTATTACTAATCTTGCTCACGAGAACAGCAGCATTAAAACCCGTGTCAGGATGGAAGGTGGAATTCCACCACTTGTTCATTTGCTTGATTTCGCCGATGTGAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACCCTGGCTTTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTTTGATTTTAATGCTACGTTCAGAAGTTCTTGCTGTTCATTATGAAGCGGTTGGTGTGATTGGAAATTTAGTCCACTCTTCACCTAATATAAAGAAAGAAGTTCTGCTCGCTGGAGCTTTACAGCCAGTTATTGGATTACTTAGTTCCAGCTGCCAAGAAAGCAAGAGAGAAGCAGCCTTGTTACTTGGACAATTTGCAGCTACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGTGCTGTCATACCTTTGATAAAGATGCTTGGGTCTGACGATGTACAACTCAGGGAAATGTCTGCTTTTGCATTGGGGAGATTGGCCCAGGACACACATAACCAGGCTGGTATTGCACACAATGGTGGCTTACAGCCGTTGCTCGACCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTCATTAGGGTAGGTGGAGTTCAGAAACTGCAGGATGGGGAATTTATTGTTCAAGCAACTAAAGATTGTGTTGCCAAGACATTGAAAAGATTAGAAGAGAAGATTCATGGTCGTGTGCTGAACCATTTGTTATATCTTATGCGAGTTTCAGAAAAGAGTTGTCAAATACAAGTTGCTTTGGCCCTTGCACATCTATGTTCTGCAGATGATCAGAGAAAAATTTTTATTGATCACTATGGTCTTGAGTTACTTATTGGGCTTATTGGCTCATCTTGCTCTAAGCTGCAACTTGATGGTGCTGTGGCTTTATGCAAGTTGGCCAATAAAGCCTCGACCCTGTCTCCTGTGGATGCTGCTCCTCCTTCTCCAACACCACAGGTCTATTTAGGAGAGCAGTATGTAAACAATGCTACATTGTCTGACGTTACATTTTTGGTTGAAGGCAAACGATTTTATGCTCATAGAATTTGTCTACTTGCATCTTCAGATGCATTTCGTGCAATGTTTGACGGTGGTTACAGGGAGAAGGATGCAAGGGACATAGAGATTCCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTGTATATTGTGGATCAGTTGATGTCACCCTGGATATTGCTCAAGATCTTCTTCGAGCAGCTGATCAATATCTTTTGGAAGGACTTAAGAGACTCTGTGAGTACACAATTGCACAGGATATATCGCTAGAGAATGTGTCAAGCATGTATGAACTTTCAGAAGCCTTCAATGCAATATCACTGAGGCATGCATGCATCCTTTTTATCTTGGAGCAATTTGATAAATTGAGTGCAAGGCCGGGGCACTCTCTTCTGATTCAGCGTATAATACCTGAGATCCACAATTACTTTGTTAAAACTCTTGCAAAGGCCAACTTTCATAATAACAGACTAAGCTGGAAGAAGATCCTTGGTGAAGTATATGTTGGACAAAACTAG 2220 0.4509 LPVNQSKHSVQNLPSLLSFMELQRRQDQSLSQRKGQKRKLDEEQHQERQISAAPSTADERAALLSDITEQVSILESTFTWNEADRSAAKRATHALADLAKNEEVVNVIVEGSAIPALVKHLQAPPLSDCIQNPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALTRLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRMEGGIPPLVHLLDFADVKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEVLAVHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSSCQESKREAALLLGQFAATDSDCKVHIVQRGAVIPLIKMLGSDDVQLREMSAFALGRLAQDTHNQAGIAHNGGLQPLLDLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKSCQIQVALALAHLCSADDQRKIFIDHYGLELLIGLIGSSCSKLQLDGAVALCKLANKASTLSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFVYCGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHACILFILEQFDKLSARPGHSLLIQRIIPEIHNYFVKTLAKANFHNNRLSWKKILGEVYVGQN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13686g00001 739 SMART arm_5 486 526 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 288 328 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 204 244 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 246 286 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 101 153 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 154 202 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 330 370 IPR000225 GO:0005515
Mupr13686g00001 739 SMART arm_5 371 411 IPR000225 GO:0005515
Mupr13686g00001 739 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 215 IPR000225 GO:0005515
Mupr13686g00001 739 MobiDBLite consensus disorder prediction 27 57 - -
Mupr13686g00001 739 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 257 299 IPR000225 GO:0005515
Mupr13686g00001 739 ProSiteProfiles BTB domain profile. 558 625 IPR000210 GO:0005515
Mupr13686g00001 739 SMART BTB_4 558 655 IPR000210 GO:0005515
Mupr13686g00001 739 SUPERFAMILY ARM repeat 456 633 IPR016024 -
Mupr13686g00001 739 Gene3D - 291 534 IPR011989 -
Mupr13686g00001 739 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 20 719 IPR044282 -
Mupr13686g00001 739 FunFam Armadillo/beta-catenin repeat family protein 549 693 - -
Mupr13686g00001 739 Pfam BTB/POZ domain 551 653 IPR000210 GO:0005515
Mupr13686g00001 739 SUPERFAMILY POZ domain 550 652 IPR011333 -
Mupr13686g00001 739 MobiDBLite consensus disorder prediction 27 48 - -
Mupr13686g00001 739 Gene3D - 48 185 IPR011989 -
Mupr13686g00001 739 Gene3D Potassium Channel Kv1.1; Chain A 539 684 IPR011333 -
Mupr13686g00001 739 Pfam Armadillo/beta-catenin-like repeat 211 243 IPR000225 GO:0005515
Mupr13686g00001 739 Pfam Armadillo/beta-catenin-like repeat 246 285 IPR000225 GO:0005515
Mupr13686g00001 739 CDD BTB_POZ_ARIA_plant 545 660 - -
Mupr13686g00001 739 Gene3D - 186 290 IPR011989 -
Mupr13686g00001 739 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 341 383 IPR000225 GO:0005515
Mupr13686g00001 739 SUPERFAMILY ARM repeat 78 430 IPR016024 -
Mupr13686g00001 739 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 382 424 IPR000225 GO:0005515
Mupr13686g00001 739 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 215 250 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13686g00001 Mupr-Chr13686 3489 12379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13686g00001 204 410 U-box Gene Family AT5G67340 28.365 1.78e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr13686g00001 BTB 9.3e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13686g00001 - - gmx:100784348 1256.51