Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13683g00002 TACGGACACAAAGAAGCCACACACAACCACCCTCAAACCAACACCTTCTCAGATCTTACCATGCTATCTCAGTCATGTGTTATGATTGCAATATTGCTATTATTTGTTCTAGCACAAAGTGTTGTGGGAGTGAACTCACTTTCAGAAGCTGATAGGATAAGCACTTTGCCAGGGCAGCCGCCAGTCAAATTCCAGCAATATGCTGGTTACATTACAGTGGATGAGAAGCAGAAGAGAGCCTTGTTTTACTACTTTGTTGAAGCTGAAGTGGAACCAGCTTCAAAGCCACTAGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAGTGGTCTTCTGAAAAATGAATATAGTTGGAACAAAGAGGCAAATATGCTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGACTTTGTGAACGATGAAATAACAGCAAGGGACAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCAGAGTTCAAAAGCAATGATTTCTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATCGTTCAAACCAAGAACAAGTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTGGAATTTAACACGGATTTCAACTCCAGAGCTGAGTTTTTCTGGTCCCATGGACTGATATCAGATTCAACTTATGAAATCTTCACCAAAGTATGCAACTACTCCCAAATTAGGAGACAATACCAAAGTGGGACCCTTACCCCCATTTGTGCAGGAGTAAATAGGCTAGTGTCAGCGGAAGTTAGTAGATATATTGATACATATGATGTTACTCTTGATGTCTGTCTTTCAACAGCAGATCAACAAGCTTATCTGCTGAATCGACTCACTCAACTGAAAGAGGGAGGGAAGATAGATGTTTGTGTGGAAGATGAAACTATCGCATACTTGAATAGGAAAGATGTGCAAGAAGCTCTCCATGCTAGGCTCGTAGGGGTCAGCTCGTGGTCAGCTTGCAGCGATGTTCTTAAGTATGACACGCAGAATCTAGAGATTCCAACCATTTCAATTCTAGGGGCACTTGCAAAGTCAGGTATCGGGGTTCTGGTATACAGTGGAGATCAAGATTCAGTCATCCCATTACTAGGGACAAGATCCCTGGTAAATGGATTAGCCAAGGACTTTGGACTGAACACAACAGTGTCCTATAGAACCTGGTTTGAGGGAAGACAGGTGGCTGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCAACCATAAGAGGAGCTGCTCATGAAGCTCCATTTTCCCAACCAGAGAGGTCACTGGTGCTGCTAAAAGCATTTTTGGAAGGAAAGCCACTTCCACAACCATTCTGA 1449 0.4306 YGHKEATHNHPQTNTFSDLTMLSQSCVMIAILLLFVLAQSVVGVNSLSEADRISTLPGQPPVKFQQYAGYITVDEKQKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSESGLLKNEYSWNKEANMLYLESPAGVGFSYSANKSFYDFVNDEITARDNLVFLQRWFTKFPEFKSNDFFITGESYAGHYVPQLAQLIVQTKNKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQYQSGTLTPICAGVNRLVSAEVSRYIDTYDVTLDVCLSTADQQAYLLNRLTQLKEGGKIDVCVEDETIAYLNRKDVQEALHARLVGVSSWSACSDVLKYDTQNLEIPTISILGALAKSGIGVLVYSGDQDSVIPLLGTRSLVNGLAKDFGLNTTVSYRTWFEGRQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLVLLKAFLEGKPLPQPF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13683g00002 482 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Mupr13683g00002 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 Pfam Serine carboxypeptidase 57 475 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 462 IPR001563 GO:0004185|GO:0006508
Mupr13683g00002 482 FunFam Carboxypeptidase 376 475 - -
Mupr13683g00002 482 SUPERFAMILY alpha/beta-Hydrolases 54 479 IPR029058 -
Mupr13683g00002 482 FunFam Carboxypeptidase 46 479 - -
Mupr13683g00002 482 Gene3D - 377 475 - -
Mupr13683g00002 482 Gene3D - 330 365 - -
Mupr13683g00002 482 Gene3D alpha/beta hydrolase 47 305 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13683g00002 Mupr-Chr13683 8123 11890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13683g00002 338 478 Calmodulin-binding Proteins AT2G22960 29.078 2.12e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13683g00002 K16297 - gmx:100805028 868.611