Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13680g00001 ATGATGCCAGGCAATGGACAGTTAACAGTTCCTCCGGGCTTCAGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATCAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGATAAATGTAGGATCGGGTCAGGGCCTCAGAATGAGTTTTATTTCTTCAGCCATAAGGACAAGAAATACCCAACAGGAACCAGAACAAACCGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATACCACACCAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTCTTCTACACTGGCCGTGCTCCTCATGGCCAGAAGACTGATTGGATCATGCATGAGTATCGCCTTGATGAAGATGATGCTGATGTTCAGGAAGATGGGTGGGTGGTATGCAGGGTGTTCAAAAAGAAAAACCAAAATCGAGGTTACCAACAAGAAATTGAAGAAGAAGAGCACATAACCCACATGAGAACAAGTGGTCCTTGCCATGTTCTAGAGCCAAAGCATCACATGCAAGGAGGACTATATGACTACAACTTTGATGGGACAATGCACCTTCCACAGTTGTTCAGTCCAGAATCAGCTGTTGCGCCACCCACTACTACTTCCTTGGCCTCATCCATGAATGCCATGGACATTCTTGAGTGCTCTCAAAATCTGTTGAGGCTCACAACCACTGGCTGTGGACTTAACCTTATGCAGCAACAAGGGGAGAGGTTCAGTGGTGACTGGTCATTCTTGGACAAGCTACTAGCATCTCACCATGGCATGGATCATCAGCATCATCCACAAAGCAAATGTAACCCTACTCATCAAGCTGCAACAACTCCTGTGGGCACTTCAGCTCAGAAATTCCCATTCCATTACCTTGGCTGTGAGACCCATGATATTATGAAATTTTCCAAG 975 0.4574 MMPGNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEFYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDADVQEDGWVVCRVFKKKNQNRGYQQEIEEEEHITHMRTSGPCHVLEPKHHMQGGLYDYNFDGTMHLPQLFSPESAVAPPTTTSLASSMNAMDILECSQNLLRLTTTGCGLNLMQQQGERFSGDWSFLDKLLASHHGMDHQHHPQSKCNPTHQAATTPVGTSAQKFPFHYLGCETHDIMKFSK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13680g00001 325 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Mupr13680g00001 325 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Mupr13680g00001 325 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Mupr13680g00001 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 240 - -
Mupr13680g00001 325 MobiDBLite consensus disorder prediction 278 298 - -
Mupr13680g00001 325 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Mupr13680g00001 325 FunFam NAC domain-containing protein 19 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13680g00001 Mupr-Chr13680 2035 5555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13680g00001 2 325 NAC Transcription Factor Family AT1G79580 51.979 6.33e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr13680g00001 NAM 6.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13680g00001 - - vun:114178728 635.565