Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13670g00002 ATGCAACTCCAACCACTCAAGGACAAGTGTTCCACTCTACTGGCTACAAATGTCCTAAATCAAATGCAAAAGTCACAAATAATGTACTACCAGCAGCAGCAACAAGCTAAGAACATGCATCCTTTAAGGATGCACAGCCCTACTGAGAGGCATATGATGATGCAAGGAGGCAATGGGAGTGGTGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGATTAAAATGGACCCCGGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGACAAAGCCACACCAAAAACAGTATTGAAACTGATGGCGATTCCTGGACTTACTCTCTACCACTTAAAAAGTCATCTACAGAAGTACAGGATCAGTAAAAATATGCATGGACAAACCAATACTGGCAACAATAAAATTGGTGAGGAAACATCTTTTTTTAATGTTCTTTCCATCATCAACCACAGAAGCACCAAGCAGAATGCCAGAAGCAAGTGGAATTCAAATGAAACACTTAAGCATAGGCCTCCAGACAAACAAGTAAGAACACTTTGCAGTTTCCATCATTTTGTTCTGTCTCCAAGTTTCCATTGTTCAAAAGAATTCTCTATAATGGGATGCAACACTAACAAGGATCATCCCTCAATCCAGAAATACAGAAATAAATGA 672 0.4018 MQLQPLKDKCSTLLATNVLNQMQKSQIMYYQQQQQAKNMHPLRMHSPTERHMMMQGGNGSGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMAIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIGEETSFFNVLSIINHRSTKQNARSKWNSNETLKHRPPDKQVRTLCSFHHFVLSPSFHCSKEFSIMGCNTNKDHPSIQKYRNK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13670g00002 223 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 42 157 IPR044848 GO:0003700
Mupr13670g00002 223 FunFam Myb family transcription factor 71 129 - -
Mupr13670g00002 223 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
Mupr13670g00002 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Mupr13670g00002 223 SUPERFAMILY Homeodomain-like 71 127 IPR009057 -
Mupr13670g00002 223 Pfam Myb-like DNA-binding domain 74 125 IPR001005 -
Mupr13670g00002 223 Gene3D - 71 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13670g00002 Mupr-Chr13670 4617 7520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13670g00002 61 150 G2-like Transcription Factor Family AT1G79430 58.889 8.75e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr13670g00002 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13670g00002 - - gmx:100786282 231.876