Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13656g00001 ATGTACGAACAAAGTGCCTATGAGTCCGATTGGGCCCTTTTGGATTCCATTCGCCGCCACTTACTCGGCGATTCCGAGGAATACAAATTCGGAGCCCCGAATGTTAATTCCGGTAACACTGGCTCCGGTTTCAGCAGCTTGCAGTTGCACCCATGTTTGAGTGACGATTGGGGCGAACTTCCTCTCAAGGAAGACGATTCTGAGGACATGCTACTTTACGGTGTACTTAGCGATGCCATCGACGTGGGGTGGGTCCCATCTCTCGACGCAGCCTCGCCGGAGAGCTTCTCGTCCGTTACCGTCAAGTCGGAGCCGGATCTATTTCCGGCACCGGAACCCGTCTTCATTGCTCCGGTGGTAGAGAAGGCTGTGCCGGTGACGGTTCCAGCGAAGGGGAAGCACTACCGCGGCGTGAGGCAGCGGCCATGGGGGAAATTCGCGGCGGAGATCCGCGACCCGGCTAAGAACGGGGCTCGGGTATGGCTCGGGACTTTCGAGACGGCTGAGGACGCCGCGCTGGCTTACGACCGAGCCGCGTATCGAATGCGCGGCTCGCGGGCCTTGTTGAACTTTCCGCTCCGGATTAATTCGGGCGAGCCCGAACCGGTTCGGATCACGGCGAAGCGGGCGTCGCCGGAACCGTCGTCTTCTTCGGAGAGTGGGGCGTCGGCGAAGCGGCGGAAGAAGGTAGTGGGGTCCACTGTGACGGGTCAAGGTGCGTTGAGAACGGGGCAAGTGGGAAGCCAAGTGGCACAGTGCACACGTGGAGAGCAATTGTTGGTTAGCTAA 789 0.597 MYEQSAYESDWALLDSIRRHLLGDSEEYKFGAPNVNSGNTGSGFSSLQLHPCLSDDWGELPLKEDDSEDMLLYGVLSDAIDVGWVPSLDAASPESFSSVTVKSEPDLFPAPEPVFIAPVVEKAVPVTVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRITAKRASPEPSSSSESGASAKRRKKVVGSTVTGQGALRTGQVGSQVAQCTRGEQLLVS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13656g00001 262 Pfam AP2 domain 134 184 IPR001471 GO:0003700|GO:0006355
Mupr13656g00001 262 CDD AP2 133 192 IPR001471 GO:0003700|GO:0006355
Mupr13656g00001 262 FunFam Ethylene-responsive transcription factor 2 133 193 - -
Mupr13656g00001 262 SUPERFAMILY DNA-binding domain 134 194 IPR016177 GO:0003677
Mupr13656g00001 262 Gene3D AP2/ERF domain 133 195 IPR036955 GO:0003700|GO:0006355
Mupr13656g00001 262 SMART rav1_2 134 198 IPR001471 GO:0003700|GO:0006355
Mupr13656g00001 262 MobiDBLite consensus disorder prediction 200 240 - -
Mupr13656g00001 262 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Mupr13656g00001 262 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Mupr13656g00001 262 PANTHER DNA-BINDING DOMAIN 114 224 IPR044808 GO:0003700|GO:0009873
Mupr13656g00001 262 ProSiteProfiles AP2/ERF domain profile. 134 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13656g00001 Mupr-Chr13656 6924 7712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13656g00001 8 261 AP2-EREBP Transcription Factor Family AT4G17500 55.556 2.37e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr13656g00001 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13656g00001 K09286 - gmx:100819649 360.147