Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13652g00001 ATGGGGGGTAATTCCTTACCTTGTGCTTCGTGCAAGTTGTTGAGACGCCGTTGCTCCCAGGATTGCATCTTTGCTCCTTATTTTCCTTCCAGTGATCTCCACAAGTTTGCCACTGTGCACAAGGTCTTTGGCTGCAGCAATATCAGCAAAATGCTAAAGGATCTTCCAGTTCACCAAAGAGCAGATGCAGTGAGCAGTTTAGTTTATGAGGCAAATGCAAGACTTAGAAACCCTGTGTATGGTTGTGTTGGAACCATATCTTCCCTACAAACTCAAGTGTCTGAGTTACAAAACCAGCTTGCACTAGCTCAGGCAAAGATTCTTAACATGCAATCAATGTATCGAGAGGTTTGTAGCTATAATTATCCAACCTAA 375 0.432 MGGNSLPCASCKLLRRRCSQDCIFAPYFPSSDLHKFATVHKVFGCSNISKMLKDLPVHQRADAVSSLVYEANARLRNPVYGCVGTISSLQTQVSELQNQLALAQAKILNMQSMYREVCSYNYPT 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13652g00001 124 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mupr13652g00001 124 Coils Coil 86 113 - -
Mupr13652g00001 124 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 113 - -
Mupr13652g00001 124 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13652g00001 Mupr-Chr13652 6953 7455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13652g00001 1 111 AS2 family AT2G30130 76.786 2.20e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr13652g00001 LOB 7.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13652g00001 - - pop:7462094 184.496