Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13647g00003 ATGGTGCGAATGGGCAGTTCAAGACTGACGTACGTGAACAATATCATCATCCATGGAATTCACATCAAGAAAATCATGCCCAAAGATGGCAGCATGATTAGGGACTCCTACAACCACTTTGGGTTGAGGACAAGGAGCAACGGCGACGCCATCTCCCTATTTGGAGCCTCCAATATTTGGATAGATCATGTTTTCATCTCTGACTTCATTGACGGTCTTATCGATGTCATCATCTCAAATTTCCACATGACCAAACATAATGATGTGATGCTATTTGGGGCCAAACACCAGTACCAAGCAATAACGAGCTAA 312 0.4359 MVRMGSSRLTYVNNIIIHGIHIKKIMPKDGSMIRDSYNHFGLRTRSNGDAISLFGASNIWIDHVFISDFIDGLIDVIISNFHMTKHNDVMLFGAKHQYQAITS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13647g00003 103 Gene3D - 2 103 IPR012334 -
Mupr13647g00003 103 SUPERFAMILY Pectin lyase-like 9 98 IPR011050 -
Mupr13647g00003 103 PANTHER PECTATE LYASE 18-RELATED 8 99 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13647g00003 Mupr-Chr13647 10584 10912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13647g00003 9 98 Polysaccharide Lyase AT1G14420 55.670 5.79e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13647g00003 K01728 - gmx:100785801 128.257