Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13647g00001 ATGCAACAAAAGCTCTTGAACGCCCCAATCCAAAAGGTTGAATCAGTTCTCCTTTGTGCTATGGCATCATCACACAGTTTTGGTGCTTGTCCCTCTGAAGCCTCTTGCACCTCTGCCACCTTCGAAGGCATTTCCCGTAAACCTTATGTTGATGAAGAGAAAAATGACGAGGTCGCAATGAAGGAGAAGGGTGTCAAATATGAAAAGGATCAACCTTACAAGTCCAAATCCCATATGGTGTTGGATTTTGTTAAGCTATCCAAGGATGAATCAATTTGTGGGTCGAAAGTAGAATTGAATTTTTTCAACCCAATGAACTTGGGGGATTCATATTCTTGTGGGGCTAGTAACACTAAAGGGAGAGATGGGAACCACGAGGAGAAATCATCACCAGAAGCTAAGACTTTTTCTTGCAACTTTTGCAATAAAAAGTTTTCTTCGTCACAAGCTTTGGGAGGGCATCAAAACGCCCACAAGCAAGAGCGTGCTCTTGCAAAGTGTCGCCAAGAGATTGAAGTTAGTGATTTTGGTCACCCTAATTTTCTTTGTTACCCTTTCTTCACACAATCCTTCTATGACTCTTATAATAAGGCACTTGGCGTTCGAATGGAGTCTATGATTCACAAGCCATCATATCCTTTATCCTCACTTGGTTTTAGGTTTGGTCAGGGATGGCCAATACAAAAGGTTCTAAACCCTTCTCTTGATGAATTGAGGACGAGGGGTTTGCATGCAAATAGTGGAATTAGGATTCTAGGGAATGATACAGCTTTAAGGACTGAAGATGATCGTGGTACTATTGGACACATTCCCTTCCTTGGAGATTCTTCTACAAATGTTGCTACCAAATCAAACTCCATCCTAGATTGGCCAATACTCAGGACCATGGATGGTGATAATTCCAAGCAAGAAGAAACCTCCAGTTTTGATTCTTCTGGGATTGATTTATCACTTAAGCTTTAA 963 0.4133 MQQKLLNAPIQKVESVLLCAMASSHSFGACPSEASCTSATFEGISRKPYVDEEKNDEVAMKEKGVKYEKDQPYKSKSHMVLDFVKLSKDESICGSKVELNFFNPMNLGDSYSCGASNTKGRDGNHEEKSSPEAKTFSCNFCNKKFSSSQALGGHQNAHKQERALAKCRQEIEVSDFGHPNFLCYPFFTQSFYDSYNKALGVRMESMIHKPSYPLSSLGFRFGQGWPIQKVLNPSLDELRTRGLHANSGIRILGNDTALRTEDDRGTIGHIPFLGDSSTNVATKSNSILDWPILRTMDGDNSKQEETSSFDSSGIDLSLKL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13647g00001 320 MobiDBLite consensus disorder prediction 298 320 - -
Mupr13647g00001 320 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 163 IPR013087 -
Mupr13647g00001 320 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 29 320 IPR044246 GO:0009788
Mupr13647g00001 320 Gene3D Classic Zinc Finger 117 176 - -
Mupr13647g00001 320 ProSitePatterns Zinc finger C2H2 type domain signature. 138 158 IPR013087 -
Mupr13647g00001 320 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Mupr13647g00001 320 SUPERFAMILY beta-beta-alpha zinc fingers 133 163 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13647g00001 Mupr-Chr13647 4407 6265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13647g00001 129 271 C2H2 Transcription Factor Family AT5G10970 40.541 5.90e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr13647g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13647g00001 - - gmx:102661483 385.956