Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13625g00007 ATGGGTAGCTTCAGCGAAGATGAGGAATGTCGGTTTTTCGATGCTCAAGAGGATGTTGTGTCCGTTGCGGATGATGAAGGGGTATCCAAAGGTTTTGATTATGCAGTGTGGATTCAGAGTCCAAGGAGTGTGATAGAGCGTAGGGGAAGGTTTAGAAAGAGCATGGGACTTAGTGTGGATTCAATTACCCTTGAAAATCAAAAAGAAAATGAAAACGAAAATGAAAATGAAAATGAAAATTCAGTAGATGTGGGTAGTGTAGAGTGTGAAGAGGTGATGGATAGAGTGAAAGTTAATAGTGGGGCGGTGACCCGAAATTCTGTTGTGGAAGAGGAATTCTCTTCAAGCCGGACATCAATGTCTTGTTGGCATAGTGAGAATTGTCCAGAGGGGTTTGGTTTAGTGGTTAACCCACCATGTAGAGATGGGAATTTGGATCAGGAGGGGATGAGTGATGGAAGAGATCTGGATTCAGATGGGTTGGTGGTTGCGCCGGAACCTAAGGATTCGGATAATGCTTCTGCCGGGAGGACGAGCAGGGATAGAAAGGGTTGGTTGAGAAGATTGCGGTCCATGACTTGCATCTTTGACAGGCAAGAGGAAGGTGATTATGAGAGAGAAGAGGGCAGTGATGAAATGCCAGGGAGCAGGCTTAAGAAAGTTAAGGTCCGTCATTCTAAGAAGCAAATGAAGGAGCTTTCAGCTCTTTACATTAGGCAAGATATCCAAGCCCATGAAGGTTCAATTTTGACCATGAAGTTCAGTCCTGATGGCCAGTATCTTGCCAGTGGTGGTGTAGATGGGGTTGTCCGCTTGTGGCAAGTGGTTGAGGAGGATAGATGTAATGAAATTGACATTCCTGAAATTGATCCTTCTTGTATTTATTTTACTGTCAATAATCTCTCTGAATTGACACCCCTGTTCATGGATAAAGAAAAATTAAGCAAACTTAAGAGCCTGAAGAAAACATCAGATTCTGCTTGCATTGTTTTTCCTCCTAAGATCTTCCGGTTGTTGGAGAAACCATTGCATGAGTTTCGTGGGCATAGAGGTGATGTTTTGGATCTCTCTTGGTCAAACAATAATTTTCTTCTGTCATCTTCAGTTGACAAAACTGTCCGGCTATGGCAAGTGAATCATGACCATTGCTTGAAGGTTTTCTCACACATGACGAGCATACAATTCAATCCTGTGGATGATAATTATTTCATTAGCGGATCTATAGATGGAAAAGTGCGCATCTGGGCAATTCCTGATTGTCATGTTGTTGATTGGATTGATATCAAGGATATAGTGACTGCAGTATGCTATCGGCCTGATGGGCAGGGAGGGATTATTGGCTCCTTGGCAGGCAATTGTCGGTTTTATAATGTATCAGAGAATCGCTTGCAGTTAGATTCCCAACTATGCTTAATTGGTAAAAAGAAACTTCCTGGCAGAGGGATAACTGGGCTTCAGTTTCTTCCACAAGATTCTAACAAAGTTATGGTCTCCTGTGCTGATTCACAAGTCAGAATCCTTGAGGGGCTTAATGTGATTGGCAAGTACAAAAGCCTTAGCACAGGAAGCCCAATGCGTGCATCATTTACTTCTGATGGGAAACATATTCTATCAGCATGTGAGGACTCTAACGTATACCTATGGAATGTTAGTCAGGAAGAGTCTAATCCCATGAAAGCTAAGAAGATTTCGTCTTGTGAGCGGTTTTTCTCAAATGCATCCGTAGCAGTACCTTGGCATGGTTTGAAACCTCAAAATATGGAACACGAACATCAATTGGACATGTTGGATAAAAGATCATCTCAAGTTATACATCTGAATCCACCGGCTTCGTTCTCTCTGAGCCAAGAGTTTTTCTTGGAGTCTTTTCCCAAGGGATCCGCAACTTGGCCCGAGGAGAACCTTCCTGTTTCAAGCTCCAAGGCTAAAGCATCGGGGTTGCATAAATCCGAGTACAAGTTCTTGAAATCTTCATGCAAGAGTACCTCCTCTTCTCACGCGTGGGGTATGGTCATTGTCACTGCTGGCTGGGATGGTAGGATAAAATCATTCCACAATTATGGGTTACCTATACACGTTGGAGAGTATAATCAAGATTCATTGCTTTTCTGGGACACATTGTCCTTGAAAAATTACACGCTGCGAATGTTCACTGATTTGGAAGCATCA 2169 0.4288 MGSFSEDEECRFFDAQEDVVSVADDEGVSKGFDYAVWIQSPRSVIERRGRFRKSMGLSVDSITLENQKENENENENENENSVDVGSVECEEVMDRVKVNSGAVTRNSVVEEEFSSSRTSMSCWHSENCPEGFGLVVNPPCRDGNLDQEGMSDGRDLDSDGLVVAPEPKDSDNASAGRTSRDRKGWLRRLRSMTCIFDRQEEGDYEREEGSDEMPGSRLKKVKVRHSKKQMKELSALYIRQDIQAHEGSILTMKFSPDGQYLASGGVDGVVRLWQVVEEDRCNEIDIPEIDPSCIYFTVNNLSELTPLFMDKEKLSKLKSLKKTSDSACIVFPPKIFRLLEKPLHEFRGHRGDVLDLSWSNNNFLLSSSVDKTVRLWQVNHDHCLKVFSHMTSIQFNPVDDNYFISGSIDGKVRIWAIPDCHVVDWIDIKDIVTAVCYRPDGQGGIIGSLAGNCRFYNVSENRLQLDSQLCLIGKKKLPGRGITGLQFLPQDSNKVMVSCADSQVRILEGLNVIGKYKSLSTGSPMRASFTSDGKHILSACEDSNVYLWNVSQEESNPMKAKKISSCERFFSNASVAVPWHGLKPQNMEHEHQLDMLDKRSSQVIHLNPPASFSLSQEFFLESFPKGSATWPEENLPVSSSKAKASGLHKSEYKFLKSSCKSTSSSHAWGMVIVTAGWDGRIKSFHNYGLPIHVGEYNQDSLLFWDTLSLKNYTLRMFTDLEAS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 346 379 - -
Mupr13625g00007 723 MobiDBLite consensus disorder prediction 147 164 - -
Mupr13625g00007 723 PANTHER WD REPEAT DOMAIN 44 5 690 IPR040324 -
Mupr13625g00007 723 MobiDBLite consensus disorder prediction 201 219 - -
Mupr13625g00007 723 MobiDBLite consensus disorder prediction 201 224 - -
Mupr13625g00007 723 SMART WD40_4 509 549 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 339 377 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 235 274 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 419 457 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 380 416 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 468 508 IPR001680 GO:0005515
Mupr13625g00007 723 SMART WD40_4 645 685 IPR001680 GO:0005515
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 346 386 IPR001680 GO:0005515
Mupr13625g00007 723 Gene3D - 215 473 IPR015943 GO:0005515
Mupr13625g00007 723 MobiDBLite consensus disorder prediction 143 181 - -
Mupr13625g00007 723 SUPERFAMILY WD40 repeat-like 238 683 IPR036322 GO:0005515
Mupr13625g00007 723 PRINTS G protein beta WD-40 repeat signature 403 417 IPR020472 -
Mupr13625g00007 723 PRINTS G protein beta WD-40 repeat signature 261 275 IPR020472 -
Mupr13625g00007 723 PRINTS G protein beta WD-40 repeat signature 364 378 IPR020472 -
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 242 275 - -
Mupr13625g00007 723 Gene3D - 474 714 IPR015943 GO:0005515
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 390 415 IPR001680 GO:0005515
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 528 558 IPR001680 GO:0005515
Mupr13625g00007 723 Pfam WD domain, G-beta repeat 383 415 IPR001680 GO:0005515
Mupr13625g00007 723 Pfam WD domain, G-beta repeat 243 273 IPR001680 GO:0005515
Mupr13625g00007 723 Pfam WD domain, G-beta repeat 341 376 IPR001680 GO:0005515
Mupr13625g00007 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 275 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13625g00007 Mupr-Chr13625 42938 46075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13625g00007 238 407 U-box Gene Family AT2G33340 22.500 3.31e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13625g00007 - - gmx:100817209 1127.46