Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13616g00002 ATGGCAATGATAAAAGAGAATATTGAAGTGAGCCTTGGGAGGAGGCAAGCTTCCACGGCAGAAGGTGAGTTCCAAGGAACACGGGGTGTCAAGAGACGACGAAGAGAGGTTCCTGCAGCAGCAGCAGCAAGCAGTGGCGATGATAATCACCAGCAGCAGTTACCACTACAACAAGTTGGTGAAAATTCTACAATCAACACTTCAAAGAGAAGCTCAAAATTTCGCGGTGTTAGCAGACATAGATGGACGGGTAGATATGAAGCTCACTTGTGGGATAAACTCTCTTGGAACATAACACAAAAGAAAAAAGGGAAGCAAGGGGCTTATGATGAAGAGGAATCTGCTGCCAGAGCATATGATTTAGCTGCACTTAAGTATTGGGGAGCAACAACTTTCACCAATTTTCCAATATCAGATTATGAGAAAGAGATAGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACCTACAGCACTCAAGAGGAAGCTGCACGAGCTTATGACATAGCAGCCATTGAGTACAGAGGGATTCATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTTCAGCAGGAAGCACCCCTGAAGCAAAACTTGAATCACATGCAGTAGTAGAGTCTCAAAAGGTGGCATCCCCATCTAACTATGCTCTAACAGAAGAGTCAAAGTCTTTGGCTCTTCACAACAGTTTTTTCAGTCCAGATTCTCTGGATTCCCCTGTAAGGCAAGAAAATTTTGGAAACAAAACCTACCAATTCTCAAGTAACAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTCCGTTCTTCATTATTCAGAGAATTAGTTGAAAAGAATTCAAATGTATCTGGAGATGAAGCTGACGGGGAAGTCACAAAGGATCAACAGCCACAAATAGCTAGTGATGATGAACTGGGTGGAATCTTCTATGATAGTATTGCTGATATCCCATTTGTCTGTGATCCCAATAGATACAACTTGGAATTACAAGAAAGAGACCTGCACTCAATATTTGGGTCATAG 1179 0.4224 MAMIKENIEVSLGRRQASTAEGEFQGTRGVKRRRREVPAAAAASSGDDNHQQQLPLQQVGENSTINTSKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGATTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWLKPSAGSTPEAKLESHAVVESQKVASPSNYALTEESKSLALHNSFFSPDSLDSPVRQENFGNKTYQFSSNKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVTKDQQPQIASDDELGGIFYDSIADIPFVCDPNRYNLELQERDLHSIFGS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13616g00002 392 PRINTS Ethylene responsive element binding protein signature 212 232 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 Gene3D AP2/ERF domain 72 138 IPR036955 GO:0003700|GO:0006355
Mupr13616g00002 392 Gene3D AP2/ERF domain 171 232 IPR036955 GO:0003700|GO:0006355
Mupr13616g00002 392 SMART rav1_2 73 142 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 SMART rav1_2 172 236 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 FunFam AP2-like ethylene-responsive transcription factor 171 232 - -
Mupr13616g00002 392 SUPERFAMILY DNA-binding domain 72 138 IPR016177 GO:0003677
Mupr13616g00002 392 MobiDBLite consensus disorder prediction 14 72 - -
Mupr13616g00002 392 Pfam AP2 domain 72 128 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 Pfam AP2 domain 171 222 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 300 - -
Mupr13616g00002 392 ProSiteProfiles AP2/ERF domain profile. 172 230 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 SUPERFAMILY DNA-binding domain 171 232 IPR016177 GO:0003677
Mupr13616g00002 392 ProSiteProfiles AP2/ERF domain profile. 73 136 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 CDD AP2 171 232 IPR001471 GO:0003700|GO:0006355
Mupr13616g00002 392 MobiDBLite consensus disorder prediction 45 72 - -
Mupr13616g00002 392 CDD AP2 72 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13616g00002 Mupr-Chr13616 3514 5565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13616g00002 69 234 AP2-EREBP Transcription Factor Family AT5G57390 69.822 3.61e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr13616g00002 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13616g00002 - - gmx:100792612 691.419