Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13611g00002 ATGGGTTTATCTTCTTTGCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCATCTGGGGACATGCTAACATGCTCAAGGCCCATGATAGAGAGGAGGCTGAGACCCCCACATGACCAAGCTCTAAAGTGCCCCAGGTGTGACTCAACCCACACCAAGTTCTGCTACTATAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATCCCTGTTGGTGGAGGCTGCAGAAAGAACAAAAAAGTCTCTGCCAAGAAATCCAATGACCACCAATTAGTTAACAACAATAGCCAAATCAGCCAAACACAGCCCCCACCCTCCTCCTACCATCACAACCCCAAAGACCTTCAACTCTCTTTCCCAGATGTGCAATTTTCCCACCTCAGCAACTTGCTAGGGACCAATGCAGGAGCACTGGGAAACCCTAGTTTTATGGAGGGCAAGTATGGCATTGGCATGATTGAGAATCCTAGGCCAATTGACTTCATGATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAACAGTGACATGGGCATGGGTGTTGGCCTCGGAGATATGAACGGTGCTCAAAATGGGTTGCCACCAAATTTTCATGGCCTTTGCTCCCCAGCATTTGGTGGCATGTCCCTTGATCATGGCAACAGTGTTCACAGTAACGGGGGTAGCTACTTAATGGACTCTTGCCAGCGTTTGATGCTGCCATATGATCATGCCAATGATCAGGACCATAACAATGCCTCAATTGATGTGAAGCCAAACCCTAAACAACTATTGTCCCTTGAATGGCAAGACCAGGGTTGCTCTGATGCGGGAAAAGACTCATTTGGGTATCTTAACGGTCCAGGATCATGGACTGGCATGATGAGCGGCTATGGATCTTCCACCACAAACCCTATGGTCTAA 1026 0.4756 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHQLVNNNSQISQTQPPPSSYHHNPKDLQLSFPDVQFSHLSNLLGTNAGALGNPSFMEGKYGIGMIENPRPIDFMMESKLEGIIGSSSSRNFDFFGNSDMGMGVGLGDMNGAQNGLPPNFHGLCSPAFGGMSLDHGNSVHSNGGSYLMDSCQRLMLPYDHANDQDHNNASIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMSGYGSSTTNPMV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13611g00002 341 MobiDBLite consensus disorder prediction 108 145 - -
Mupr13611g00002 341 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Mupr13611g00002 341 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Mupr13611g00002 341 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Mupr13611g00002 341 MobiDBLite consensus disorder prediction 118 144 - -
Mupr13611g00002 341 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 203 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13611g00002 Mupr-Chr13611 3762 5273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13611g00002 1 199 C2C2-Dof Transcription Factor Family AT5G62940 49.345 5.95e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr13611g00002 zf-Dof 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13611g00002 - - gmx:778107 573.163